Transcript Information: R_Transcript_121625.p1


Annotated TAIR IDAT3G51850.1
Annotated Gene Namecalcium-dependent protein kinase 13
Annotated Gene Symbol(s)CPK13
Annotation TypeOrtholog
Chromosome Positionchr3:19232667-19235526 | Forward length=528
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.858895308431
Replicate 222.994082732028
Replicate 332.9070670691
Condition 2: 8 Hour
Replicate 126.769994140085
Replicate 228.117974554028
Replicate 333.560160680604
Condition 3: 24 Hour
Replicate 143.30287893136
Replicate 235.592908470801
Replicate 348.593971226507


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_121625.p1 GENE.R_Transcript_121625~~R_Transcript_121625.p1 ORF type:complete len:536 (+),score=102.39,Pkinase|PF00069.21|3.5e-73,EF-hand_1|PF00036.28|7.8e-06,EF-hand_1|PF00036.28|0.099,EF-hand_1|PF00036.28|3.7e-07,EF-hand_1|PF00036.28|1.9e-09,Pkinase_Tyr|PF07714.13|4.8e-25,EF-hand_7|PF13499.2|1.1e-09,EF-hand_7|PF13499.2|1.1e-12,EF-hand_6|PF13405.2|8e-05,EF-hand_6|PF13405.2|12,EF-hand_6|PF13405.2|4.5e-07,EF-hand_6|PF13405.2|5.9e-06,EF-hand_5|PF13202.2|7.8e-06,EF-hand_5|PF13202.2|45,EF-hand_5|PF13202.2|1.1e-05,EF-hand_5|PF13202.2|7.3e-07,EF-hand_8|PF13833.2|0.00048,EF-hand_8|PF13833.2|1.4e-07,EF-hand_8|PF13833.2|4.8,EF-hand_8|PF13833.2|4.6e-08 R_Transcript_121625:213-1820(+)
ATGGGGAATTGTTGCAGATCTCCAGCCGCAGTAGCAAGAGAAGACGTTAAATCGAAGAACTCAGAAAATCGAAGGAAAGAGAAACAGAAACATCACAATCATTCAACCACAAAAAAATCAACGACAGCAACATCTTCGATCACCGTCTTACCTGACGTGCCAAAAGAATCGATCGAAGAGAAGTATTTAGTGGATAGAGAGTTAGGGCGAGGCGAATTCGGAGTAACCTACCTTTGTATCGACAAAACCTCAAGAGAGCTACTCGCATGTAAGTCGATTTCAAAGCGAAAGCTCCGTACAGCAGTGGATATAGAAGATGTGAGGAGAGAAGTAGCGATAATGAAGCATTTGCCAAAGAGCTCGAGTATAGTGAGCTTGAAGGAAGCTTGTGAGGATGAGAATGCGGTGCATTTGGTGATGGAGTTGTGTGAAGGAGGAGAGCTGTTTGATCGGATCGTGGCGAGAGGTCGTTATACTGAAAGAGCAGCAGCTGCTGTTACTAGAACTATTGTGGAAGTGGTTCAGCTTTGTCATAAGCATGGTGTTATTCATAGGGATTTGAAACCTGAGAACTTTTTGTTCGCTAATAAGAAGGAGAATTCGCCCTTGAAAGCCATTGATTTTGGCCTTTCTATCTTCTTTAAGCCTGGTGAACGGTTCTCTGAGATTGTCGGAAGTCCGTATTATATGGCCCCAGAGGTCCTAAAGCGAAATTATGGACCTGAAATTGATATATGGAGTGCCGGAGTTATTCTGTATATATTATTATGTGGAGTTCCTCCATTTTGGGCAGAGTCCGAGCAAGGGGTGGCACAGGCTATTTTACGTGGCATTATTGATTTCAAACGGGATCCATGGCCTAATGTTTCAGAGAGTGCAAAGAGTTTGGTTCGACTAATGTTGGAGCCAGATCCAAAGAAAAGACTAACAGCAAAACAAGTACTTGAGCATCCTTGGCTACAGAATGCCAAGAAGGCTCCAAACGTGCCACTTGGAGATGTTGTAAAATCAAGGCTCAAGCAATTCTCAATGATGAACAGATTCAAGAGGAAAGCTTTGAGGGTTATTGCCGAGTTCTTGTCTGTTGAAGAAGTTGAAGACATTAAGGAAATGTTCAAGAAGATAGACACAGATGATGATGGAATCATTACAGTTGAAGAACTTAAAACCGGTCTCTTAAAGTTTGGGTCCCCTCTTGCAGAGTCTGAAGTACAAATGCTCATTGAAGCTGTTGACACAAGTGGGAAAGGAACTTTAGACTACGGAGAATTTCTTGCTGTTTCGCTCCATTTACAGAGAATGGCAAATGATGAGCACCTTCGGAAGGCCTTCTCCTACTTTGACAAGGATGGAAACGGTTTTATTGAACCAGAAGAACTCCAAAATGCCTTGATGGAAGATGGGGTTGATGATTGCATTAACGTTGCCAATGACATTTTCCAAGAGGTGGACACGGATAAGGATGGGAAAATCAGCTACGATGAATTTGTTGCAATGATGAAAACTGGAACTGACTGGAGAAAGGCATCTAGACATTATTCGAGAGGTAGATTTAACAGCCTGAGCATAAAGCTAATGAAGGATGGTTCATTGAACTTGGGGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_121625.p1 GENE.R_Transcript_121625~~R_Transcript_121625.p1 ORF type:complete len:536 (+),score=102.39,Pkinase|PF00069.21|3.5e-73,EF-hand_1|PF00036.28|7.8e-06,EF-hand_1|PF00036.28|0.099,EF-hand_1|PF00036.28|3.7e-07,EF-hand_1|PF00036.28|1.9e-09,Pkinase_Tyr|PF07714.13|4.8e-25,EF-hand_7|PF13499.2|1.1e-09,EF-hand_7|PF13499.2|1.1e-12,EF-hand_6|PF13405.2|8e-05,EF-hand_6|PF13405.2|12,EF-hand_6|PF13405.2|4.5e-07,EF-hand_6|PF13405.2|5.9e-06,EF-hand_5|PF13202.2|7.8e-06,EF-hand_5|PF13202.2|45,EF-hand_5|PF13202.2|1.1e-05,EF-hand_5|PF13202.2|7.3e-07,EF-hand_8|PF13833.2|0.00048,EF-hand_8|PF13833.2|1.4e-07,EF-hand_8|PF13833.2|4.8,EF-hand_8|PF13833.2|4.6e-08 R_Transcript_121625:213-1820(+)
MGNCCRSPAAVAREDVKSKNSENRRKEKQKHHNHSTTKKSTTATSSITVLPDVPKESIEEKYLVDRELGRGEFGVTYLCIDKTSRELLACKSISKRKLRTAVDIEDVRREVAIMKHLPKSSSIVSLKEACEDENAVHLVMELCEGGELFDRIVARGRYTERAAAAVTRTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAIDFGLSIFFKPGERFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAESEQGVAQAILRGIIDFKRDPWPNVSESAKSLVRLMLEPDPKKRLTAKQVLEHPWLQNAKKAPNVPLGDVVKSRLKQFSMMNRFKRKALRVIAEFLSVEEVEDIKEMFKKIDTDDDGIITVEELKTGLLKFGSPLAESEVQMLIEAVDTSGKGTLDYGEFLAVSLHLQRMANDEHLRKAFSYFDKDGNGFIEPEELQNALMEDGVDDCINVANDIFQEVDTDKDGKISYDEFVAMMKTGTDWRKASRHYSRGRFNSLSIKLMKDGSLNLGN*

Click here to download the sequence:
Link to NCBI Protein BLAST