Transcript Information: R_Transcript_12169.p1


Annotated TAIR IDAT4G14220.1
Annotated Gene NameRING-H2 group F1A
Annotated Gene Symbol(s)RHF1A
Annotation TypeOrtholog
Chromosome Positionchr4:8196012-8198240 | Forward length=371
E-Value1.4E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.52423547866
Replicate 210.985943046103
Replicate 313.420108894716
Condition 2: 8 Hour
Replicate 117.065905872322
Replicate 223.174004817229
Replicate 328.089159061043
Condition 3: 24 Hour
Replicate 120.314180940878
Replicate 217.644207112462
Replicate 320.251654033533


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12169.p1 GENE.R_Transcript_12169~~R_Transcript_12169.p1 ORF type:5prime_partial len:495 (+),score=82.97,zf-RING_2|PF13639.2|3e-10,zf-rbx1|PF12678.3|7.1e-08,zf-RING_11|PF17123.1|2e-06,zf-RING_11|PF17123.1|42,zf-C3HC4|PF00097.21|4.1e-06,zf-RING_5|PF14634.2|1.2e-05 R_Transcript_12169:3-1487(+)
TTGTACCTAATGTACATCCAAGGAAAGGAGGGTACTGGATTCTTGAAACCGTCACGTCTGAATGGGATCAGATCTTTCCTCCTTCCGCGTCTTTTATCTCTTTCTCTCTCCTCTTTTTGGTTTATTCTTTCCTTTCTTTTGACCCCCTCTCTTCTTGACTCTTTCTCTTCCCGCTCTCTCTCTCCTCCCCCAAACCCAAACCCTCTCTACTCCCTTCTTTTACCTTCTACCTCACTTCTCACCTACACCTCTCTCTCAACAATGGCGGAATCCACTACTACATCAACAACAACCGCTGAAAAATCTCCGATGATGATGATGACGTCATCAATTCCGGCGTCTTCAGCTGGATCATCCTCGTTTACAACTCCACCGCCACCAATTGACGACGATTTTGACGACGACGCTTGCAGCATTTGCCTTGAGCCTTTTTCTCTCTCTGATCCTTCCACTGTGACAGCTTGCAAGCATGAGTACCACCTTCATTGTATTCTTGAATGGTCGCAACGGAGTAAAGAATGCCCAATTTGTTGGCAGTCCCTCGCCTTGAAGGACCCTGCAAGCCAAGAGCTTTTAGCTGTGGTTGAGCTGGAAAGGAAGGCTAGGCGAAGGAACGTAACAACCAATGAATTCAGCAATGCTCGTCACTATGAGGGGTCTGATTCTGTAAATGGCTCTCAATGGACCGATGATTCTGATTTCAATGAGCGTATAATGCGGCATTTGGCTGCTATGATGAGCCGAGCTCGGCAAGCCCATAGAAACGAGCGGCACCGATCTTCTGAGCGGAGCCCTTCTCCGGTTCTTATGTTTCCATCACGTGCCAGCGATTCAACTGTGCATCCAAACACACCTGAAGAGGGGTGTTCTGCTTATGGCTCATCAGGAGGCAGCTCACCCACTTCTAGCATATCTTCTCTTGACGCCCAGCCTGCTCTATCCCCTAGTCCTTCTTTTGCCAATGTGTCTTCAGGCTCCGTGCCAAAGAGAGACATTCATTACAGTTCCGGATCCTTTCAAAGCCAGTTCCCTGATAATACTCAAAGACCAAGGTCATCAGAGCTGCTTGCCTTCTCAGAGACTGTTAAATCCAGATTAACTGCTGCTTCAGCCAGATACAAGGATTCAATTTCGAAGAGAACACAAGGTTTCAGAGAGAAATTTCTGGCACGTAATAATTCTGTCAAGGAACTGAGTAAAGGAGTTCAGCGTGAGATGAATGCCAGTATAGCTGGTGTTGCAAAGATGATTGAGCGATTGGATCTCAAATCCAAGCGACACTCACATGTTGTTGAAGGTCAAAGTAATGCTGGGGAAAGCTCCAACTTCTTTACAAAGGGAAAAGGGGTGCTGGATAATATTATAGCTAACTCCCGTGAAAATCGTGTCATGACTGACCAAGGTATTATTTCCCATGAACAATCTCAGGCCACCTGCTCCATCCCAAGCCATAAAGATACCTCCTATGCACAGAGAGGTAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12169.p1 GENE.R_Transcript_12169~~R_Transcript_12169.p1 ORF type:5prime_partial len:495 (+),score=82.97,zf-RING_2|PF13639.2|3e-10,zf-rbx1|PF12678.3|7.1e-08,zf-RING_11|PF17123.1|2e-06,zf-RING_11|PF17123.1|42,zf-C3HC4|PF00097.21|4.1e-06,zf-RING_5|PF14634.2|1.2e-05 R_Transcript_12169:3-1487(+)
LYLMYIQGKEGTGFLKPSRLNGIRSFLLPRLLSLSLSSFWFILSFLLTPSLLDSFSSRSLSPPPNPNPLYSLLLPSTSLLTYTSLSTMAESTTTSTTTAEKSPMMMMTSSIPASSAGSSSFTTPPPPIDDDFDDDACSICLEPFSLSDPSTVTACKHEYHLHCILEWSQRSKECPICWQSLALKDPASQELLAVVELERKARRRNVTTNEFSNARHYEGSDSVNGSQWTDDSDFNERIMRHLAAMMSRARQAHRNERHRSSERSPSPVLMFPSRASDSTVHPNTPEEGCSAYGSSGGSSPTSSISSLDAQPALSPSPSFANVSSGSVPKRDIHYSSGSFQSQFPDNTQRPRSSELLAFSETVKSRLTAASARYKDSISKRTQGFREKFLARNNSVKELSKGVQREMNASIAGVAKMIERLDLKSKRHSHVVEGQSNAGESSNFFTKGKGVLDNIIANSRENRVMTDQGIISHEQSQATCSIPSHKDTSYAQRGN*

Click here to download the sequence:
Link to NCBI Protein BLAST