Transcript Information: R_Transcript_121839.p1


Annotated TAIR IDAT4G08150.1
Annotated Gene NameKNOTTED-like from Arabidopsis thaliana
Annotated Gene Symbol(s)KNAT1, BP, BP1
Annotation TypeOrtholog
Chromosome Positionchr4:5147969-5150610 | Reverse length=398
E-Value5.1E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3979450769117
Replicate 22.4351379348799
Replicate 32.7747852242762
Condition 2: 8 Hour
Replicate 13.3447186654742
Replicate 22.0747209955739
Replicate 31.7309525591606
Condition 3: 24 Hour
Replicate 13.4318371629042
Replicate 21.1368690149782
Replicate 33.1590501609955


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_121839.p1 GENE.R_Transcript_121839~~R_Transcript_121839.p1 ORF type:complete len:388 (+),score=78.49,KNOX2|PF03791.9|3.9e-24,KNOX2|PF03791.9|3.4e+02,KNOX1|PF03790.9|4.6e-23,Homeobox_KN|PF05920.7|1.2e-16,ELK|PF03789.9|7.7e-10,Homeobox|PF00046.25|1.3e-06 R_Transcript_121839:417-1580(+)
ATGGAGAATTACAGCCATGAAATGAGCGAGAATTGTGGAGGTCATAATCCTCATCATAGGTCAAATTTCACCTATGTAACGTCGTCAATTCTTGCTCCAAATAACTCCTCTTCTACTTCTCCTCCCTCGTCGTATGGCGGTGGTGGAAGGACTGCATTTCAGCCGTGCTTTCAGCCGCACGATGGTGGTCATCCGGTGGTGAAAACCGAAGGTGGTGGTGGTGGTCAGTATTTTCCGAGATTTCACTACCCTTTGCTTACTAGTGTTGGTGCTCGAACTCAAGTTCCACCGAATCATCACCATCAAGAACAACAAGTTGTTGGTGGTGGCGGTAATGGTAATACTACTACTAGTAGTAGTAATGAGGTTGAAGCTATTAAAGCAAAGATTATGGCTCATCCTCAATACTCAAATCTCTTGGAAGCTTACCTTGATTGCCAAAAGGTAGGAGCGCCACCGGAAATAGCAGCGAGGCTGGCGGCAGCGCAGCAGGAATTCGAGGCGAGGCAACGGGCCTCATTTACAGCATGTATGGATGGCTCTAAGGACCCTGAACTCGATCAATTTATGGAGGCGTATTATGATATGCTGGTCAACTATAGAGAGGAGCTAACAAGGCCTGTCCAAGAAGCAATGGAGTTCATGCGAAGAATTGAAGCTCAGCTTAACGTCCTTTGTAATGGCCGTGTCCGTGTCTTCTCTACTGATGAGAAATCGGAAGGAGTAGGATCATCAGAAGAGGAGCAAGAAAACAGCGGAGAGACAGAAGCAGCAGAGATAGACCCGCGAGCTGAAGACCGAGAACTGAAGAATCACCTCCTTAAGAAATACAGCGGCTACTTGAGTAGTCTCAAGCAGGAGCTCTCTAAGAAGAAGAAGAAAGGTAAGCTTCCCAAGGAGGCCCGCCAGAAGCTGCTTAGCTGGTGGGAGTTGCATTACAAGTGGCCTTATCCTTCGGAATCGGAGAAAGTGGCACTAGCAGAAGCAACGGGATTGGACCAAAAACAGATCAACAACTGGTTCATAAACCAGAGAAAACGCCATTGGAAGCCATCGGAAGACATGCAATTCATGGTGATGGATGGTATTCATCCTTCACAAAATGCCGCACTTTACATGGATGGACATTACATGGGAGACGGACCTTATCGATTTGGGACGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_121839.p1 GENE.R_Transcript_121839~~R_Transcript_121839.p1 ORF type:complete len:388 (+),score=78.49,KNOX2|PF03791.9|3.9e-24,KNOX2|PF03791.9|3.4e+02,KNOX1|PF03790.9|4.6e-23,Homeobox_KN|PF05920.7|1.2e-16,ELK|PF03789.9|7.7e-10,Homeobox|PF00046.25|1.3e-06 R_Transcript_121839:417-1580(+)
MENYSHEMSENCGGHNPHHRSNFTYVTSSILAPNNSSSTSPPSSYGGGGRTAFQPCFQPHDGGHPVVKTEGGGGGQYFPRFHYPLLTSVGARTQVPPNHHHQEQQVVGGGGNGNTTTSSSNEVEAIKAKIMAHPQYSNLLEAYLDCQKVGAPPEIAARLAAAQQEFEARQRASFTACMDGSKDPELDQFMEAYYDMLVNYREELTRPVQEAMEFMRRIEAQLNVLCNGRVRVFSTDEKSEGVGSSEEEQENSGETEAAEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSESEKVALAEATGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGIHPSQNAALYMDGHYMGDGPYRFGT*

Click here to download the sequence:
Link to NCBI Protein BLAST