Transcript Information: R_Transcript_121942.p1


Annotated TAIR IDAT1G48930.1
Annotated Gene Nameglycosyl hydrolase 9C1
Annotated Gene Symbol(s)AtGH9C1, GH9C1
Annotation TypeOrtholog
Chromosome Positionchr1:18101782-18104587 | Reverse length=627
E-Value6.1E-231
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3971993749162
Replicate 20.90603172528116
Replicate 31.4182407892552
Condition 2: 8 Hour
Replicate 11.5619501092051
Replicate 22.307408069916
Replicate 32.0773888327272
Condition 3: 24 Hour
Replicate 10.77531056303691
Replicate 20.45517419849221
Replicate 32.5871020549241


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_121942.p1 GENE.R_Transcript_121942~~R_Transcript_121942.p1 ORF type:5prime_partial len:533 (+),score=81.51,Glyco_hydro_9|PF00759.15|2.8e-131 R_Transcript_121942:1-1599(+)
CTTCCCTCCAATCTTAGAGTTTCTTGGCGCGGTGATTCTGGCCTCAACGATGGATTTTCACAAAATGTGGACTTAGTGGGAGGATACTATGATGCAGGGGACCACGTTAAGTTTGGGCTTCCAATGGCATATAGTGTGACTCTACTCGCTTGGGCGGCTGTAGATTACAGGAGAGAGATTTTAGGAGCAAATCAGATGGAACATACCCTTGACGCCATTCGTTGGGGGACTGATTACTTCATCAAGGCACACTGTGAGACTAATGTTCTTTGGGCCCAGGTAGGAGATGGAGAAGCTGATCACAGTTGCTGGGAGCGTGCTGAGGACATGACGACTCCCAGAACAGCTTATCGGCTTGATTCTAGCAAACCTGGTTCTGATCTTGCAGGGGAAACTGCGGCTACCTTGGCCGCATCTTCTTTGGCGTTTAAGCCCTACAACTCTTCCTACTCTAAGCTTTTATTAGATCATGCAAAACGGGTTTTCTCGTTTGCAGATAATTATAGAGGCCAGTATGATGATTCCATCCCAGATGCAGAAAGTTTCTACCCTTCATCTGGATATTCGGATGAGCTCTTGTGGGGGGCTGCTTGGCTATACCGAGCCACAAAAAACGACTACTATCTGCAATATGCTGTGAATAATGCTGTTGACATGGGTGGCACAGGAAATGCTGTCAAAATCTTCTCCTGGGATAACAAATATGCTGGTGTGCAAATCCTTTTGTCAAAGGTTCTGTTGGATGGGGATGGTGATTCATATACTAGCACTTTGAATCAATACAAAGCCAAGGCAGATTTCTTTGCCTGTGCTTATATGCAGAAAAACAATGGATATAATGTCCCTATGACTCCAGGAGGATTGGCTTATCTTCTGCCCTCGAACAACCTGCAGTATGCTGCCTCGGCTGCCTTCCTTCTAGTTGTCTATTCTGATTATCTAACTCGTACAAGTTCTGTGGTTGAATGCCCTGATAGCAAAGTACAGCCTCAAGATCTCCTCACCTTTGCAAAGTCACAAGCTGATTACATTCTTGGAAAAAATCCAGAGTCAATGAGCTATTTAGTAGGATATGGGGACAAGTATCCCAAAAAGACTCACCACAGAGATTCCTCAATGCCATCGATATATGTCCTTCAAGGAGCAGTTGGATGTGTTCAAGGGTTTGAGACTTTGTACAAAAGTCCTAATGCAAACCCGAATGTTCTACAAGGAGCTCTTGTTGGAGGCCCTGATAGTAGCGATACCTTTACTGATGACCGAGATAACTACGACCAAAATGAGGCTACAACGGCTTCTGCTGCTCCCCTCATTGGCCTTTTCTCCAAGCTATACAGCATATCCTCCTCAAATACAGGTTACAGTCCTTCTACTCCTAAACAACCATCAACAGGTCCTAAATATGAAGAGTATTCAGCTCCGGTCGTGTCATCAGGTCCAGATCAGACTCAAGAAACACCTTCACCCAGCCCTGATCCAGTGGATTATGTCCTGACACAGCCATCGAACTCACCAGCGTTACATAAGCACGCGCGCCCCATCGAATATTTAGTTGTTCTAACTGTGCTAGGTTTGATGCACAGTTTTGCAATCATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_121942.p1 GENE.R_Transcript_121942~~R_Transcript_121942.p1 ORF type:5prime_partial len:533 (+),score=81.51,Glyco_hydro_9|PF00759.15|2.8e-131 R_Transcript_121942:1-1599(+)
LPSNLRVSWRGDSGLNDGFSQNVDLVGGYYDAGDHVKFGLPMAYSVTLLAWAAVDYRREILGANQMEHTLDAIRWGTDYFIKAHCETNVLWAQVGDGEADHSCWERAEDMTTPRTAYRLDSSKPGSDLAGETAATLAASSLAFKPYNSSYSKLLLDHAKRVFSFADNYRGQYDDSIPDAESFYPSSGYSDELLWGAAWLYRATKNDYYLQYAVNNAVDMGGTGNAVKIFSWDNKYAGVQILLSKVLLDGDGDSYTSTLNQYKAKADFFACAYMQKNNGYNVPMTPGGLAYLLPSNNLQYAASAAFLLVVYSDYLTRTSSVVECPDSKVQPQDLLTFAKSQADYILGKNPESMSYLVGYGDKYPKKTHHRDSSMPSIYVLQGAVGCVQGFETLYKSPNANPNVLQGALVGGPDSSDTFTDDRDNYDQNEATTASAAPLIGLFSKLYSISSSNTGYSPSTPKQPSTGPKYEEYSAPVVSSGPDQTQETPSPSPDPVDYVLTQPSNSPALHKHARPIEYLVVLTVLGLMHSFAII*

Click here to download the sequence:
Link to NCBI Protein BLAST