Transcript Information: R_Transcript_121971.p1


Annotated TAIR IDAT3G59850.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:22109343-22111566 | Reverse length=388
E-Value4E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9277932358446
Replicate 22.6311153403882
Replicate 32.5834666461826
Condition 2: 8 Hour
Replicate 12.1478828901092
Replicate 21.6812693113673
Replicate 32.684072748378
Condition 3: 24 Hour
Replicate 12.7043031070228
Replicate 23.4824092985122
Replicate 31.5908356789975


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_121971.p1 GENE.R_Transcript_121971~~R_Transcript_121971.p1 ORF type:complete len:399 (+),score=55.87,Glyco_hydro_28|PF00295.13|1.7e-83,Pectate_lyase_3|PF12708.3|2.7e-09,Pectate_lyase_3|PF12708.3|2.1e+03 R_Transcript_121971:110-1306(+)
ATGGCCAAAAAACTCTGCATAAACATATTTCTAGCATTGTGTCTTTATACCACTCTAATTCAGCCATCATTATCAGGCCTTATTACAAGAGAATACAATGTCATAAAGTTTGGAGCAAAACCCAATGGCGTAACAGACACAACCAAACACTTCCTTAGTGCATGGAATTCAGCATGCAAAAAAACTGGCCCTGCAAGAATTACCATTCCTAAGGGAAGGTATTTGCTTCATCCAATTAACTTTGATGGAAGTAATTGTATGAGCAATGATATTACCTTCAATGTTGTTGGAACTATCGTTGCGCCTCGTGATTTTCGAGTTCTTGGTGCTTCACCACATTGGATTAGCATTGATAAAGCTTATGGAGTTTCCTTCATTGGTGATGGAACTTTAGATGCCAAAGGTTCCACCTTATGGCATTGCAAAAAGGCTGGTACAGATTGCCCTGAAGGAGCAACGACACTAAGCATTACCAGTTCGAACAACATAGTGATAAAGGGAATTACCTCACTAAACAGCCAAATGTTCCACATTGTGATCAATCACTGTAAAAATATTTACATGGAAGCTGTCAAGATCAGAGCTCCCGGAAACAGCCCCAACACCGATGGCATTCACGTACAACTATCAAGGGATGTCACCATTCTCAACACCGCCGTGAAAACAGGGGACGATTGCATCTCCATTGGTCCTGGCACCAAGAACTTGTGGATTCAGCGTGTTGCTTGTGGCCCTAGTCATGGCATTAGCATAGGAAGTCTGGCAAAAGACGAGGAAGAAGAAGGGGTGCAAAATGTGACAGCAAGAACAATTGTGCTCAGCCATTCCACAAATGGGGTGAGAATTAAAGCATGGGGAAGGCCTAGCCAAGGCTTTGTTCGAGGGGTCGTCTTTCAAGATATCCTTATGCGGAATGTTTGGAACCCTATTATCATTGATCAAAATTACTGCCCTCACAACGAAAACTGTCCTGGTCAGGAATCAGGTGTACAAATCCGTGATGTGACATACAAAGATATAAGAGGGACATCATTAACAGAAGTTGCAGTAAAATTTGATTGTAGCTCATCAGATCCCTGCACTGGGATTAAACTCCAGAATGTCAATCTCACATACCGAAAACGGGAGGCTAAATCATATTGCAAGAATGCAGCAGGCAAGGCTCTTGGCTTGGTCAATCCCAAGAGTTGCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_121971.p1 GENE.R_Transcript_121971~~R_Transcript_121971.p1 ORF type:complete len:399 (+),score=55.87,Glyco_hydro_28|PF00295.13|1.7e-83,Pectate_lyase_3|PF12708.3|2.7e-09,Pectate_lyase_3|PF12708.3|2.1e+03 R_Transcript_121971:110-1306(+)
MAKKLCINIFLALCLYTTLIQPSLSGLITREYNVIKFGAKPNGVTDTTKHFLSAWNSACKKTGPARITIPKGRYLLHPINFDGSNCMSNDITFNVVGTIVAPRDFRVLGASPHWISIDKAYGVSFIGDGTLDAKGSTLWHCKKAGTDCPEGATTLSITSSNNIVIKGITSLNSQMFHIVINHCKNIYMEAVKIRAPGNSPNTDGIHVQLSRDVTILNTAVKTGDDCISIGPGTKNLWIQRVACGPSHGISIGSLAKDEEEEGVQNVTARTIVLSHSTNGVRIKAWGRPSQGFVRGVVFQDILMRNVWNPIIIDQNYCPHNENCPGQESGVQIRDVTYKDIRGTSLTEVAVKFDCSSSDPCTGIKLQNVNLTYRKREAKSYCKNAAGKALGLVNPKSCL*

Click here to download the sequence:
Link to NCBI Protein BLAST