Transcript Information: R_Transcript_122008.p1


Annotated TAIR IDAT3G57500.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G26520.1); Has 51 Blast hits to 51 proteins in 11 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:21281980-21282351 | Forward length=123
E-Value9E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9984993746042
Replicate 23.3716686799895
Replicate 32.0064295704659
Condition 2: 8 Hour
Replicate 13.3958498831946
Replicate 21.3057449250327
Replicate 30.92745455724605
Condition 3: 24 Hour
Replicate 14.5245313514453
Replicate 23.380733114614
Replicate 33.9941066946893


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122008.p1 GENE.R_Transcript_122008~~R_Transcript_122008.p1 ORF type:complete len:137 (+),score=27.56 R_Transcript_122008:332-742(+)
ATGGTTGTGTACATGTGGAGAGCAGTTGGGAGGTGGGAGAGTAATAACCAGCTACCACCAGTATTGGTGGAACCGCCACCGGTGGTTCCACCAGTGGTGGTAGCTGACAGCGGCCGGTACAACCACCGGTCCATTGAGACTCTGGTGGTTGTACTGGCCGTGATCACCATTGTTGCGGTCATTGCAGGCATCATTGCCCGGGTGTGTGGCGGGCGGCATCTGGGTGGGAGCGGAGAGCATGACATTGAAGGGTGGGTGGAGAGCAAGTGCCGGAGCTGCATTGACGGAGGCCTTCCACCACCTTCACCACCACCGGCAGCGGTTTCCGAGGAATCAAAACCAACAGCAACAGCAGAGGAAGCAATAAGTGACAACCATAATAAACATAGTACTAAAAATTATATCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122008.p1 GENE.R_Transcript_122008~~R_Transcript_122008.p1 ORF type:complete len:137 (+),score=27.56 R_Transcript_122008:332-742(+)
MVVYMWRAVGRWESNNQLPPVLVEPPPVVPPVVVADSGRYNHRSIETLVVVLAVITIVAVIAGIIARVCGGRHLGGSGEHDIEGWVESKCRSCIDGGLPPPSPPPAAVSEESKPTATAEEAISDNHNKHSTKNYIL*

Click here to download the sequence:
Link to NCBI Protein BLAST