Transcript Information: R_Transcript_122019.p1


Annotated TAIR IDAT5G51200.1
Annotated Gene NameProtein of unknown function (DUF3414)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20804926-20819408 | Forward length=1838
E-Value6.1E-247
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3525846651524
Replicate 21.4413044812672
Replicate 32.1249292760809
Condition 2: 8 Hour
Replicate 11.5445629094737
Replicate 22.240236770731
Replicate 35.1188215478642
Condition 3: 24 Hour
Replicate 14.088960099925
Replicate 22.5778874027948
Replicate 35.7257260869249


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122019.p1 GENE.R_Transcript_122019~~R_Transcript_122019.p1 ORF type:3prime_partial len:539 (+),score=104.14,Nup192|PF11894.4|7e-30 R_Transcript_122019:242-1855(+)
ATGGTTTCCCCGAAGCAGCTACTATCAACTATCGAATCAACTCTTTTAGGCCCTTCGCCGCCATCTCCTTCTGATAGAATCGAGCTTATGCACGCCATTCGCTCCTCTCTTTCCTCTCTCCAGAATCTCCTTTCTTTTCCTCCACCGAGACCGGCGGACCGTACGGAGGTCCAGTCGAAAGAAGTGAGGTTGCCTGATTCTTCGTGGATTTCGTTGGATGATCAGGATGTTCAAATTGCTTTGAAGTTGAGCGACGATCTCCACCTGAATGAAATTGATTGTGTCCGGTTGTTAGTTTCTGCTAACCAAGAGTGGGCATTGCTGGGACGAGAACCTTTGGAAATTCTGCGTCTAGCTGCGGGACTTTGGTATACAGAGAGAAGAGATTTAATTACAGCCTTGTACACATTGTTTCGGGCTGTTGTGCTTGACCAGGGACTTGAAGGGGATTTGGTGGCAGATATTCAGAAGCACTTGGAGAATCTTATAAATGCTGGGCTTAGACAGCGTTTGATTACATTAGTCAAGGAACTAAATCGTGAAGAACCAGCTGGTTTAGGGGGACCCAATGCAGAGCAATTTGTCATTGATGCTCGTGGTGCTATTGTGGAGCGTCGTGCAGTTGTCAGCCGGGAGAGACTTATCCTTTCTCATTGCCTTGTCCTGTCTGTTCTAGTTGTGCGGACAAGTCCCAAAGATATAAGGGATATTTTCTCTGTTCTCAAGGACAGTGCTGCCGAACTTAATAGCTTCAAAGAGACCGCAAAATATCAGATTACATATGGCATCCTTTTTTCTCTTGTAATTGCATTCACTTCAGATGCTTTGAGCACTGTTCCAGAGAAAGTGTCTGTTCTTTCGCGTGATGCTTCCTTTCGACAAGAATTTCAGGATATTGTAATTGCTCCTGTAAATGATCCTATTGTTGGGGGTTTTGTTAATTGTGTAATACTAGCATGGGCGGTGCATTTGATGTTAGTCCAAGATGGAGTTGCTGCTAGAGAAACGGTTGCGGGTGTTTCATCCAAGGATTTGCAGAGCATCGGCTCTTACTTGGAAGTCATTTTCTCAAATAATGTATTTCAATTTTTTCTGGACAAAGTTCTTCGCACTGCTGCTTATCAGAATGATGATGAGGATATGATATATATGTATAGTGCTTACCTTCACAAGCTTATCACAATTTTCTTGTCTGAGCCACTTGCCCGAGATAAGGTAAAAGAGGTAAAAGACAAGGTTATGGCTATGCTAAGCCCTTACCGCATGGGGGTACCATATGGTTTTTCTAGCTTGGACAATGGAAATTTGGATCAAGCTGCTGAAATGGGTCACCAGCCATTCATTTCTCTATTGGAGTTCATTAGTGAGATCTATCAGAAAGAACCAGAGCTTCTCTCAGGCAATGATGTTGTGTGGACTTTTGTTAATTTCGCTGGGGAAGATCATACCAATTTCCAGACGCTGGTTGCGTTCTTGAAAATGCTTGGTGCCTTGGCTTCCAATGAAGAGGGTGCCTCAAAGGTTTTCGAGCTACTTCAGGGGAAAACTTTTCGTTCTGTTTCCTGGAGCACTTTATTTGATTGCCTATCGATTTATGCTGAGAAATTCAAGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122019.p1 GENE.R_Transcript_122019~~R_Transcript_122019.p1 ORF type:3prime_partial len:539 (+),score=104.14,Nup192|PF11894.4|7e-30 R_Transcript_122019:242-1855(+)
MVSPKQLLSTIESTLLGPSPPSPSDRIELMHAIRSSLSSLQNLLSFPPPRPADRTEVQSKEVRLPDSSWISLDDQDVQIALKLSDDLHLNEIDCVRLLVSANQEWALLGREPLEILRLAAGLWYTERRDLITALYTLFRAVVLDQGLEGDLVADIQKHLENLINAGLRQRLITLVKELNREEPAGLGGPNAEQFVIDARGAIVERRAVVSRERLILSHCLVLSVLVVRTSPKDIRDIFSVLKDSAAELNSFKETAKYQITYGILFSLVIAFTSDALSTVPEKVSVLSRDASFRQEFQDIVIAPVNDPIVGGFVNCVILAWAVHLMLVQDGVAARETVAGVSSKDLQSIGSYLEVIFSNNVFQFFLDKVLRTAAYQNDDEDMIYMYSAYLHKLITIFLSEPLARDKVKEVKDKVMAMLSPYRMGVPYGFSSLDNGNLDQAAEMGHQPFISLLEFISEIYQKEPELLSGNDVVWTFVNFAGEDHTNFQTLVAFLKMLGALASNEEGASKVFELLQGKTFRSVSWSTLFDCLSIYAEKFKQ

Click here to download the sequence:
Link to NCBI Protein BLAST