Transcript Information: R_Transcript_122038.p2


Annotated TAIR IDAT3G17740.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1740 (InterPro:IPR013633); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast hits to 335 proteins in 133 species: Archae - 1; Bacteria - 0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:6068003-6072814 | Reverse length=1149
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0140533863733
Replicate 20.93316890739102
Replicate 30
Condition 2: 8 Hour
Replicate 10.81619549824151
Replicate 20.49690848535968
Replicate 30.20168456244874
Condition 3: 24 Hour
Replicate 10.25508674697449
Replicate 20.49011686423505
Replicate 31.2159835937165


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122038.p2 GENE.R_Transcript_122038~~R_Transcript_122038.p2 ORF type:5prime_partial len:90 (+),score=10.21 R_Transcript_122038:1-270(+)
GGCGTTGCTATATTGCATATGAGAGAGATAGAGGAAATCTTTCTGCTGCAAGAAAAATATTTTTCCGAGCTATTCATGCATGTCCATGGTCATCCTGCTTCTCAATGTCCTTTCAAGGCAACAAGTAGGTCAAACACTACTCCTAGTCCGGTGTCCGCTCCCTCTTTTGCATCTATGACTGCTGCCGAGATTGTTGAAGTCCCGTGGTACCCTGACTCCGCTGCGGCAACCCATTCCGAAGGACAAGAAAACGGGGGCAGTTCTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122038.p2 GENE.R_Transcript_122038~~R_Transcript_122038.p2 ORF type:5prime_partial len:90 (+),score=10.21 R_Transcript_122038:1-270(+)
GVAILHMREIEEIFLLQEKYFSELFMHVHGHPASQCPFKATSRSNTTPSPVSAPSFASMTAAEIVEVPWYPDSAAATHSEGQENGGSSS*

Click here to download the sequence:
Link to NCBI Protein BLAST