Transcript Information: R_Transcript_122045.p1


Annotated TAIR IDAT1G56345.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21093409-21094454 | Reverse length=322
E-Value1.2E-124
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2896113718008
Replicate 21.1981584476692
Replicate 31.30717796065
Condition 2: 8 Hour
Replicate 11.9961302946124
Replicate 21.9444245079292
Replicate 32.2689513275484
Condition 3: 24 Hour
Replicate 12.183487100461
Replicate 21.3185209119367
Replicate 31.4869364597077


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122045.p1 GENE.R_Transcript_122045~~R_Transcript_122045.p1 ORF type:complete len:368 (+),score=68.96,PseudoU_synth_2|PF00849.18|9.8e-24 R_Transcript_122045:218-1321(+)
ATGGCTCTTGCAAACCATCAGATCCTACAGCCGAGGCCATTCATGTTTTCCTCTTCAGCTCGCTCCTTTCCTTTCCCTTCTCGTATCGCAACCTCCCTACTCAAACCCTCAACCTTGTTTCTCAATTGTCAAACAACCCCACTTTCATCAATGTCATCCAAAACACAAAACCTATCAGATGAGCAAACCCATTTGCCAGATGACCCTAAAACCCCACCTGTCCCATCATATCCAACCCCTTTGTCCCCTCCATTGCCTCCAATCTCCAAGCAAATTGAGCTAACTAGGGCTTTAACGGCCTCTTCGAAATCTAGCCTTTACTCCCTCTCAAGGGATGATGTGATATTCGAGGATGAATGGCTGTTGGTTGTCAATAAACCCTCTGGGATTTATTGTGAGAATGTCCTTTCTTCTGCTTCAAACCTCGTCCGACAATCTCTTGATTCAGCAGCAGCCTTGGAGGTCCATCTTGCTAACAGGTTGGATCGTGACACAAGTGGTGTAATGGTTATAACCAAATTACACAAAGTAGCTGGCAAGCTTGTTAAGGCATTTACTGATCACAAGGTCCAGAAAACCTACATTGCTCTTTCTATTTGTTCAGAACCAAAATGGGACAGAATCAGAGTAAAATCTGGCCATGGTAGATCTAAATTTGGAGCCTGGCGTGTATATGCTGCATCAGATGTTGGTCGAATCCTACCTGGTGGATCTGTAGTGAGGGACATGGAAACTTTATTTGAGGTGTTATCAATAAATGGACAGGATTACTTTAACAATTCAACTGAAACTACAAAAGATGAAAAAACAGTTGTGGTTGAGGAGAAGTCCTCAACAGATGTTAGCCAAATGAAGGATGAGATTTTGGTGCGAGCTTTTCCAAAGAGTGGAAGAACTCATCAAATACGCTTGCATTGTCAATACCTGGGAATTCCTATAAAGGGAGACGTGAAATATGAAGGTGTTTGTGAGTGGAAAGGGGAAGCTTGTGATGGTCATGCACTTCATGCCGAGAGTTTGTCACTTGAACATCCTGTTACTGGTGTTCAACTGCTACTTAAGGCACCGTTACCATTATGGGCTAGCCAGGCTATGCAATTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122045.p1 GENE.R_Transcript_122045~~R_Transcript_122045.p1 ORF type:complete len:368 (+),score=68.96,PseudoU_synth_2|PF00849.18|9.8e-24 R_Transcript_122045:218-1321(+)
MALANHQILQPRPFMFSSSARSFPFPSRIATSLLKPSTLFLNCQTTPLSSMSSKTQNLSDEQTHLPDDPKTPPVPSYPTPLSPPLPPISKQIELTRALTASSKSSLYSLSRDDVIFEDEWLLVVNKPSGIYCENVLSSASNLVRQSLDSAAALEVHLANRLDRDTSGVMVITKLHKVAGKLVKAFTDHKVQKTYIALSICSEPKWDRIRVKSGHGRSKFGAWRVYAASDVGRILPGGSVVRDMETLFEVLSINGQDYFNNSTETTKDEKTVVVEEKSSTDVSQMKDEILVRAFPKSGRTHQIRLHCQYLGIPIKGDVKYEGVCEWKGEACDGHALHAESLSLEHPVTGVQLLLKAPLPLWASQAMQL*

Click here to download the sequence:
Link to NCBI Protein BLAST