Transcript Information: R_Transcript_122084.p1


Annotated TAIR IDAT4G15560.1
Annotated Gene NameDeoxyxylulose-5-phosphate synthase
Annotated Gene Symbol(s)CLA1, DEF, CLA, DXS, DXPS2
Annotation TypeOrtholog
Chromosome Positionchr4:8884218-8887254 | Forward length=717
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.076800677228831
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.30907823916579
Replicate 20
Replicate 30.10183231764593
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122084.p1 GENE.R_Transcript_122084~~R_Transcript_122084.p1 ORF type:3prime_partial len:713 (+),score=132.48,DXP_synthase_N|PF13292.2|9e-112,Transket_pyr|PF02779.20|1.1e-41,Transketolase_C|PF02780.16|1e-22,E1_dh|PF00676.16|4e-07 R_Transcript_122084:141-2276(+)
ATGGCGGTGCAAGGCGCTTTCACAATCCCACCCTCACCTCTACATTCTTGTTTAACGCCTTCTCTACGAAACATCAGCCACCAAAGACGGCTGATCATGAGAGCTTCAGCTAGCAGTGACTCATATGAAGAGAGTAAGAAGTTGATTAGGAAGGAAATTGATGGCTGGAAAATAGAGTACACAGGGGAGAAACCAGCCACTCCCTTGCTGGACACTATTAAATACCCTGTGCACATGAGAAACCTGTCTACTGAGGATCTTGCACAGCTAGCAGCAGAGCTTAGAGCAGAAATGGTATATGCAGTGGCAAAAACAGGTGGGCACCTGGGCGCAAGCTTGGGGGTAGTGGAGCTAACAGTGGCCCTACACCATGTCTTTAACACACCTGACGACAGAATCATTTGGGATGTTGGTCATCAGGCATATCCACACAAAATTCTAACAGGACGAAGATCTAAGATGCAAACAATAAGGAAGACCTCAGGACTTGCAGGGTTTCCAAAAAGAGATGAAAGTATATATGATGCTTTTGGTACGGGGCATAGTTCAACTAGCATATCTGCTGGTCTTGGCATGGCAGTTGCGAGAGACCTTTTAGGAAAAAAGAACAATGTTATTTCAGTGATTGGGGATGGAGCGATGACTGCAGGACAGGCATATGAGGCTTTAAATAATGCAGGGTACCTTGACACTAACCTCATTGTCATACTGAATGACAATAAGCAAGTTTCTTTGCCCACCGCAACTCTTGATGGGCCTGCAACTCCTGTTGGAGCACTCAGCAGCGCTCTTTCAAAGCTCCAAGCAAGTCCCAAATTCCGAAAACTTCGGGAAGCGGCCAAGAGCATCACAAAGCAAATTGGAGGAGAAACTCACAAGGTTGCAGCAAAAGTGGATGAATATGCAAGAGGCATGATCGGTGGTACAAGATCTACACTATTTGAAGAACTTGGTTTGTACTACATTGGGCCTGTGGATGGGCATAACATAGATGACCTGATCACAATATTAAAGCAAGTCAAAGAAATGCCAGCACCAGGGCCAGTTTTAATTCACACAGTCACTGAGAAAGGGAAGGGCTACCCACCAGCAGAGGCAGCATCTGACAGAATGCATGGTGTCGTAAAGTTCAACCCAGAATCAGGAAAGAAGTTCAAGCCCAAATCCCCTACACTTTCATATACAGAATACTTTGCTCAGGCTTTAACAAAAGAAGCGGAGGTAGATGAGAAGATTGTGGCTCTTCATGCTGCAATGGGTGGTGGAACAGGTCTAAACTACTTCCAGAAGAGATTTCCCAATCGTTGCTTTGATGTGGGCATTGCCGAGCAGCATGCTGTAACATTTGCAGCAGGTCTGGCAACAGAGGGCCTCAAGCCTTTCTGCACCGTCTACTCATCGTTTCTACAGCGAGGATATGATCAGGTGGTGCATGATGTAGATCTCCAAAGACTGCCCGTCAGATTTGCCATGGATAGAGCCGGTTTAGTGGGTGCAGATGGACCAACCCACTGTGGTGCGTTTGATATCACCTACATGGCTTGTTTGCCAAATATGATTGTTATGGCTCCATCAGATGAAGCAGAGCTGATGCACATGGTTGCAACAGTGGCAGCTATAGATGACAGGCCAAGCTGCTTCAGATACCCAAGGGGGAAGGGGATAGGAGTATCCCTTCCACCTGACAATAAAGGAACACCACTTGAGATTGGAAGGGGGAGAGTATTGGTTGAAGGGATCAAGGTTGCAATGCTGGGTTATGGCTCTATGGTTCAACAATGCCTAGAAGCCGCATCTTTGCTCAAAGAGCGGGACATTTTATTGACAGTGGCTGATGCGAGGTTTTGCAAACCTCTGGACGGAGATCTTATCAGGAAACTTGCAAATGAACATGAAATACTCATAACCGTAGAGGAGGGCTCTATAGGAGGTTTTGCTTCTCATGTGTCACACTTCCTTTGTCTCAATGGTCTTTTGGATGGACCCCTCAAGGTAACTCTTAAGACAGACCTTCGGGGATTTTTCATTTTTTTCTTTCCAGAAAAAAGAAAGGAAGAAAAAAAATTCACAGTGCTTTATACTTTGGACTTAGCCCTTTCAAATCATTTTATACAGTTCAGAGCAATGGTCCTTCCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122084.p1 GENE.R_Transcript_122084~~R_Transcript_122084.p1 ORF type:3prime_partial len:713 (+),score=132.48,DXP_synthase_N|PF13292.2|9e-112,Transket_pyr|PF02779.20|1.1e-41,Transketolase_C|PF02780.16|1e-22,E1_dh|PF00676.16|4e-07 R_Transcript_122084:141-2276(+)
MAVQGAFTIPPSPLHSCLTPSLRNISHQRRLIMRASASSDSYEESKKLIRKEIDGWKIEYTGEKPATPLLDTIKYPVHMRNLSTEDLAQLAAELRAEMVYAVAKTGGHLGASLGVVELTVALHHVFNTPDDRIIWDVGHQAYPHKILTGRRSKMQTIRKTSGLAGFPKRDESIYDAFGTGHSSTSISAGLGMAVARDLLGKKNNVISVIGDGAMTAGQAYEALNNAGYLDTNLIVILNDNKQVSLPTATLDGPATPVGALSSALSKLQASPKFRKLREAAKSITKQIGGETHKVAAKVDEYARGMIGGTRSTLFEELGLYYIGPVDGHNIDDLITILKQVKEMPAPGPVLIHTVTEKGKGYPPAEAASDRMHGVVKFNPESGKKFKPKSPTLSYTEYFAQALTKEAEVDEKIVALHAAMGGGTGLNYFQKRFPNRCFDVGIAEQHAVTFAAGLATEGLKPFCTVYSSFLQRGYDQVVHDVDLQRLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMIVMAPSDEAELMHMVATVAAIDDRPSCFRYPRGKGIGVSLPPDNKGTPLEIGRGRVLVEGIKVAMLGYGSMVQQCLEAASLLKERDILLTVADARFCKPLDGDLIRKLANEHEILITVEEGSIGGFASHVSHFLCLNGLLDGPLKVTLKTDLRGFFIFFFPEKRKEEKKFTVLYTLDLALSNHFIQFRAMVLP

Click here to download the sequence:
Link to NCBI Protein BLAST