Transcript Information: R_Transcript_122134.p1


Annotated TAIR IDAT2G46080.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18948317-18949360 | Reverse length=347
E-Value3.8E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1147.64217678644
Replicate 2114.08334659693
Replicate 3125.47927195528
Condition 2: 8 Hour
Replicate 1113.14158285969
Replicate 2155.64495586993
Replicate 3159.38544793517
Condition 3: 24 Hour
Replicate 1120.55676110706
Replicate 2101.09565713144
Replicate 3120.65192879132


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122134.p1 GENE.R_Transcript_122134~~R_Transcript_122134.p1 ORF type:5prime_partial len:406 (+),score=68.38,DUF793|PF05633.7|9.8e-06,DUF793|PF05633.7|0.00042,DUF241|PF03087.10|8.4e-09 R_Transcript_122134:3-1220(+)
GTTTCACTATTGCATATTTGCATCGTCAACGGTTATCACAAACCCTTTCTATCTACTCCTTTCATTCTGACCATTTCAACTAACACCATATTTCGTATCCTATCTCCTCCTTCTCTCTCTAAGACCTCTATAATCGTTTCTTTGATTTCATCTACAGACATGAGTCGTCCACAGGAGCCACACAGGGCATTTTTTCCCCTTGGGAACCCTTTCAAGATGAGACGTCCCAAGGCGTACATGTCCCCTAAACTTCTGGAGCTTTTGAACAAGTTTGAGGTCACTTTGGCTGCTAGGATGAGAAAACTTAAGCCTGAGCACCATGATAGCATCTTCAGCTTACCCTGGATGATATTGGCTATGCAGCTCCTCTCGGAGACGCATAGTGATATAAAGTCCTTGATAACTGAACTTGAGCTACCTGTGCATGACTGGGATGACAAATGGATTGATGTCTATTTGGACAACAGTGTGAAATTGCTTGATGTATGCATTGCTTTCAGCTCTGAGCTGTCACAACTAAGCCAAGGACAGCTTCTGCTCCATTGCGTGCTGCGTAATCTGGATGGAGCCAATTCAACCGAAGTTCAGAAGGCCAAATCTTCAATTGATAGGTGGAGGCAGCACATTGGTATGAAGAACACAAGAGTTGAAAATTGTTCTCCCATTGTAGATAAGCTGCTGGAATCATTAGAATTGCCCAAGGTTAAGGACTCAGCGAAGGGTAAGGTTTTGATGCAAGCTATGTATGGGGTCAAGGTGCAAACATTGTTTGTCTGCAATGCCTTCATTTCTGCCTTCACTGGTTCGAACAAAAAGTTGACAGATTTGCAAGTAGCTGGGACACATTTATGGGCAGATTCTTTCAAAGATCTCCAGATTCTTGTTAATGGCGAGATTAGAAGGTTGATCTCAGGTGGAAGAGTACTTCTCCTGAAAGAGCTGGAGCAAGTTGACACAATTCTCAAGGAATCTTATCCCATGATCGAGGAAGGTAAAGAGCCTGTGTCAGCTGAAGCATTCCCGAATCGTGTCACAGATTTACAGAGAAGTTCAGACAAACTCTCATCTGGATTGGATCTTTTGGCTAAGGAAGTGGATGGGTTTTTCCAAATAGTGTTAAGCGGACGTGATGCGCTGCTTTGTAACCTAAGATTATCCAGCAGTTCCATCGATTCTCCAAAAAAGTACAAGGTGGAGGATCAAGTCTTTGTAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122134.p1 GENE.R_Transcript_122134~~R_Transcript_122134.p1 ORF type:5prime_partial len:406 (+),score=68.38,DUF793|PF05633.7|9.8e-06,DUF793|PF05633.7|0.00042,DUF241|PF03087.10|8.4e-09 R_Transcript_122134:3-1220(+)
VSLLHICIVNGYHKPFLSTPFILTISTNTIFRILSPPSLSKTSIIVSLISSTDMSRPQEPHRAFFPLGNPFKMRRPKAYMSPKLLELLNKFEVTLAARMRKLKPEHHDSIFSLPWMILAMQLLSETHSDIKSLITELELPVHDWDDKWIDVYLDNSVKLLDVCIAFSSELSQLSQGQLLLHCVLRNLDGANSTEVQKAKSSIDRWRQHIGMKNTRVENCSPIVDKLLESLELPKVKDSAKGKVLMQAMYGVKVQTLFVCNAFISAFTGSNKKLTDLQVAGTHLWADSFKDLQILVNGEIRRLISGGRVLLLKELEQVDTILKESYPMIEEGKEPVSAEAFPNRVTDLQRSSDKLSSGLDLLAKEVDGFFQIVLSGRDALLCNLRLSSSSIDSPKKYKVEDQVFVR*

Click here to download the sequence:
Link to NCBI Protein BLAST