Transcript Information: R_Transcript_122136.p1


Annotated TAIR IDAT2G46080.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18948317-18949360 | Reverse length=347
E-Value9E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 186.532555637185
Replicate 260.552293546262
Replicate 368.663652942541
Condition 2: 8 Hour
Replicate 166.14206482046
Replicate 280.278326412553
Replicate 394.567650392633
Condition 3: 24 Hour
Replicate 172.444636140755
Replicate 256.254524528312
Replicate 374.472239650727


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122136.p1 GENE.R_Transcript_122136~~R_Transcript_122136.p1 ORF type:5prime_partial len:405 (+),score=73.64,DUF793|PF05633.7|9e-06,DUF793|PF05633.7|0.0003,DUF241|PF03087.10|4.6e-09 R_Transcript_122136:3-1217(+)
GTTTCACTATTGCATATTTGCATCGTCAACGGTTATCACCAAACCCTTTCTATCTCCTCCTTTCTTTCTGACCATTTCAACGAACACCATATTATCCTATCTCCTCTTTCTCTCTCTAAAACTTCTATAATCGTTTCCTTGATTCCATCTACAGACATGAGTCGTCCACAGGAGCCACACAGGGCATTTTTTCCCCTTGGGAACCCTTTCAAGATGAGACGTCCCAAGGCGTACATGTCCCCTAAACTTCTGGAGCTTTTGAACAAGTTTGAGGTCACTTTGGCTGCTAGGATGAGAAAACTTAAGCCTGAGCACCATGATAGCATCTTCAGCTTACCCTGGATGATATTGGCTATGCAGCTCCTCTCGGAGACGCATAGTGATATAAAGTCCTTGATAACTGAACTTGAGCTACCTGTGCATGACTGGGATGACAAATGGATTGATGTCTATTTGGACAACAGTGTGAAATTGCTTGATGTATGCATTGCTTTCAGCTCTGAGCTGTCACAACTAAGCCAAGGACAGCTTCTGCTCCATTGCGTGCTGCGTAATCTGGATGGAGCCAATTCAACCGAAGTTCAGAAGGCCAAATCTTCAATTGATAGGTGGAGGCAGCACATTGGTATGAAGAACACAAGAGTTGAAAATTGTTCTCCCATTGTAGATAAGCTGCTGGAATCATTAGAATTGCCCAAGGTTAAGGACTCAGCGAAGGGTAAGGTTTTGATGCAAGCTATGTATGGGGTCAAGGTGCAAACATTGTTTGTCTGCAATGCCTTCATTTCTGCCTTCACTGGTTCGAACAAAAAGTTGACAGATTTGCAAGTAGCTGGGACACATTTATGGGCAGATTCTTTCAAAGATCTCCAGATTCTTGTTAATGGCGAGATTAGAAGGTTGGTCTCAGGTGGAAGAACACTTCTTCTGAAAGAGCTGGAGCAGGTTGACACAATTCTCAAGGAATCTTATCCCATGATCGAGGAAGGCAAAGAGCCTGGGTCAGCTGAAGCATTCCAGAATTGTGTCACAGATTTACAGAGAAGTTCAGACAAACTCTCATCTGGATTGGATCTTTTGGCTAAGGAAGTGGATGGGTTTTTCCAAATAGTGTTAAGCGGACGTGATGCGCTGCTTTGTAACCTAAGATTATCCAGCAGTTCCATCGATTCTCCAAAAAAGTACAAGGTGGAGGATCAAGTCTTTGTAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122136.p1 GENE.R_Transcript_122136~~R_Transcript_122136.p1 ORF type:5prime_partial len:405 (+),score=73.64,DUF793|PF05633.7|9e-06,DUF793|PF05633.7|0.0003,DUF241|PF03087.10|4.6e-09 R_Transcript_122136:3-1217(+)
VSLLHICIVNGYHQTLSISSFLSDHFNEHHIILSPLSLSKTSIIVSLIPSTDMSRPQEPHRAFFPLGNPFKMRRPKAYMSPKLLELLNKFEVTLAARMRKLKPEHHDSIFSLPWMILAMQLLSETHSDIKSLITELELPVHDWDDKWIDVYLDNSVKLLDVCIAFSSELSQLSQGQLLLHCVLRNLDGANSTEVQKAKSSIDRWRQHIGMKNTRVENCSPIVDKLLESLELPKVKDSAKGKVLMQAMYGVKVQTLFVCNAFISAFTGSNKKLTDLQVAGTHLWADSFKDLQILVNGEIRRLVSGGRTLLLKELEQVDTILKESYPMIEEGKEPGSAEAFQNCVTDLQRSSDKLSSGLDLLAKEVDGFFQIVLSGRDALLCNLRLSSSSIDSPKKYKVEDQVFVR*

Click here to download the sequence:
Link to NCBI Protein BLAST