Transcript Information: R_Transcript_122236.p1


Annotated TAIR IDAT2G36990.1
Annotated Gene NameRNApolymerase sigma-subunit F
Annotated Gene Symbol(s)SIGF, SIG6, ATSIG6, SOLDAT8
Annotation TypeOrtholog
Chromosome Positionchr2:15537502-15540016 | Reverse length=547
E-Value1.6E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5809651220623
Replicate 20.49597560038499
Replicate 31.0822080754088
Condition 2: 8 Hour
Replicate 11.735218775789
Replicate 21.936769293331
Replicate 31.5721867466477
Condition 3: 24 Hour
Replicate 11.0846208139073
Replicate 21.7366345583132
Replicate 31.0340647883573


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122236.p1 GENE.R_Transcript_122236~~R_Transcript_122236.p1 ORF type:5prime_partial len:127 (+),score=9.57,Sigma70_r4|PF04545.12|3.4e+03,Sigma70_r4|PF04545.12|7.3e+03,Sigma70_r4|PF04545.12|2.7e-19,Sigma70_r3|PF04539.12|1.4e-05,Sigma70_r3|PF04539.12|91 R_Transcript_122236:3-383(+)
GCAAAGCTTCAGAACTTGCTATTTTTTATGAGAAATCCTCTTTCTATGCAACAGCCAGTGTGGACAGATCAGGATACCACTTTTCAGGAGGTGACTGCAGACACAAGAATCGAGAGTCCAGGAATAAGCGTGGAAAGGCAACTTATGAGGAAACATGTACATAATCTACTTGGTACTCTCACCCCTAGAGAACGGCAAATAATAAAGCTGAGATATGGGATTGGATCTGGGTCCGGGAATCAAAGTACTTTAACCGAAGTTGGGACCGTCTTTGGGCTGTCGAAGGAGAGGGTCCGGCAGATAGAAAGTCGAGCACTGTACAAGCTTAAGCAATCACTCAACAACCATGGCTTAGAAGCATATACAGATTTACTCGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122236.p1 GENE.R_Transcript_122236~~R_Transcript_122236.p1 ORF type:5prime_partial len:127 (+),score=9.57,Sigma70_r4|PF04545.12|3.4e+03,Sigma70_r4|PF04545.12|7.3e+03,Sigma70_r4|PF04545.12|2.7e-19,Sigma70_r3|PF04539.12|1.4e-05,Sigma70_r3|PF04539.12|91 R_Transcript_122236:3-383(+)
AKLQNLLFFMRNPLSMQQPVWTDQDTTFQEVTADTRIESPGISVERQLMRKHVHNLLGTLTPRERQIIKLRYGIGSGSGNQSTLTEVGTVFGLSKERVRQIESRALYKLKQSLNNHGLEAYTDLLV*

Click here to download the sequence:
Link to NCBI Protein BLAST