Transcript Information: R_Transcript_122238.p1


Annotated TAIR IDAT2G36990.1
Annotated Gene NameRNApolymerase sigma-subunit F
Annotated Gene Symbol(s)SIGF, SIG6, ATSIG6, SOLDAT8
Annotation TypeOrtholog
Chromosome Positionchr2:15537502-15540016 | Reverse length=547
E-Value3.5E-172
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5632402386797
Replicate 23.4482975136256
Replicate 34.5562671495997
Condition 2: 8 Hour
Replicate 13.6639432950257
Replicate 24.6109117665218
Replicate 35.2666169500758
Condition 3: 24 Hour
Replicate 13.8961242193001
Replicate 22.3343157219954
Replicate 34.3136352302644


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122238.p1 GENE.R_Transcript_122238~~R_Transcript_122238.p1 ORF type:complete len:548 (+),score=103.71,Sigma70_r3|PF04539.12|2.6e+03,Sigma70_r3|PF04539.12|0.18,Sigma70_r3|PF04539.12|1e-17,Sigma70_r4|PF04545.12|4.6e+03,Sigma70_r4|PF04545.12|4.4e+02,Sigma70_r4|PF04545.12|4.9e+02,Sigma70_r4|PF04545.12|6.5e-17,Sigma70_r2|PF04542.10|5.9e-16 R_Transcript_122238:377-2020(+)
ATGGAAGCTGTCATGAATTTGCTTTCTTCATCTTCTCCATTTCCTTCAAGGACCCACCTCAGAAACAGTCCATTGTCTCTTTCAGCTTCCATGCTTAATGAGCAAACATCTACCATTCCTTCCATACCAACTTCTTCCTTATGGAGACAATATCGCACCTCTGTTCTTTCACAGGAGCAGCGTGATGAGTGTAGGCCTTCCTTGCTCAATGTCAAGGAGGATAGGACGTCTCAGTTGCAGTCAACCTTGATCAGAACGAAGATTGAGGATTGTGCATCTGTACTAGAACTCATGGGGACTCCTGATCAGCATCTTGGTGATTTTAATGATCAACTTTGCTTTTGGTCTGGTTTATCATATCTACTGCCAACTCTGGAAAAGAAAGAACATCCAGCCTTAGCTGGTGTGGATAATCACATGCGTACAGATATGGCTGCATCTGATGTAATCTCCCTGGCTAGGGAAGCTCTTTCAGCCTCAAAACTAGCCTTGTCATTAGCTGAGAGCTCTGATCTATTGGATGCTGATAGGCTAAATGATAAAACATTGAAGCCAAGAAGAGTAATGTCTACCAGGCTTCTGGAGAGGAAAGCTAAGAAAAGGACATCCTCGAAGCCTAAAATAATTCATAACACTGGAAACTCTGAAAAGCCACAATCAAGAAGGTCAAGTGAAAGGGTTGATCGTACTGACCCCCTTCGACTGTTTCTTGGGGATCCAGAGACGAAGCAATTATTGACAATAGAAGAAGAAAATGAATCGATAAGACAGATTCAGGACCATATTAAATTGCTTGATGTGAAGAGAAATCTTCAGGCTCAATTTGACCGTGAACCAACATTTGCTGAGTGGGCTAATGCTGTTGGGCTGAGTTCAATGGCTCTGCGCTCAAAAGTTCACGCTTGGAAGAGAAGTCGGGAAAAGTTGATATATGCTAACTTCCGTTTGGTGGTTCACATAGCAAAACAATATCAGGGTCGTGGCCTCAGTCTTCAGGATCTATTGCAGGAAGGAAGCATGGGTTTAATGAAGAGCGTGGAAAAGTTCAAGCCGCAGGCTGGTTGTCGATTTCCAAGTTATGCCTATTGGTGGATAAGGCAATCAATTAGGAAGGCAATATTCCAGCATTCAAGGATAATCCGTGTGCCAGAAAACATGTATGGCCTTCTCGGCAAGGTCCTTGAAGCGAGAAAAGCATACATCCAAGAAGGAAACCAGTATCCAACAACAGAAGAACTGGCAAAACATGTTGGAATTACAGTTGCAAAGCTCCAGAACTTGCTATGTTTGATGAGAAATCCTCTTTCGATGCAACAGCCGGTGTGGACAGATCAGGATACCACTTTTCAGGAGGTGACTGCAGACACAAGAATCGAGAGCCCAGAAATAAGCGTGGAAAGGCAACTCATGAGGAAACATGTACGTAATCTACTTGGTGCTCTCACTCCTAGAGAACGGCAAATAATAAAGCTGAGATATGGGATCGGATCTGGGTCCGAGAAACAAAGTACTTTAACCGCAATTGGGACTGTCTTTGGGCTGTCGAAGGAGAGGGTCCGGCAGATAGAAAGTCGAGCACTGTACAAGCTTAAGCAATCACTCAACAACCATGGCTTAGAAGCATATACAGATTTACTCGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122238.p1 GENE.R_Transcript_122238~~R_Transcript_122238.p1 ORF type:complete len:548 (+),score=103.71,Sigma70_r3|PF04539.12|2.6e+03,Sigma70_r3|PF04539.12|0.18,Sigma70_r3|PF04539.12|1e-17,Sigma70_r4|PF04545.12|4.6e+03,Sigma70_r4|PF04545.12|4.4e+02,Sigma70_r4|PF04545.12|4.9e+02,Sigma70_r4|PF04545.12|6.5e-17,Sigma70_r2|PF04542.10|5.9e-16 R_Transcript_122238:377-2020(+)
MEAVMNLLSSSSPFPSRTHLRNSPLSLSASMLNEQTSTIPSIPTSSLWRQYRTSVLSQEQRDECRPSLLNVKEDRTSQLQSTLIRTKIEDCASVLELMGTPDQHLGDFNDQLCFWSGLSYLLPTLEKKEHPALAGVDNHMRTDMAASDVISLAREALSASKLALSLAESSDLLDADRLNDKTLKPRRVMSTRLLERKAKKRTSSKPKIIHNTGNSEKPQSRRSSERVDRTDPLRLFLGDPETKQLLTIEEENESIRQIQDHIKLLDVKRNLQAQFDREPTFAEWANAVGLSSMALRSKVHAWKRSREKLIYANFRLVVHIAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFPSYAYWWIRQSIRKAIFQHSRIIRVPENMYGLLGKVLEARKAYIQEGNQYPTTEELAKHVGITVAKLQNLLCLMRNPLSMQQPVWTDQDTTFQEVTADTRIESPEISVERQLMRKHVRNLLGALTPRERQIIKLRYGIGSGSEKQSTLTAIGTVFGLSKERVRQIESRALYKLKQSLNNHGLEAYTDLLV*

Click here to download the sequence:
Link to NCBI Protein BLAST