Transcript Information: R_Transcript_12249.p1


Annotated TAIR IDAT5G08415.1
Annotated Gene NameRadical SAM superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2710983-2713101 | Reverse length=394
E-Value1.8E-213
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.732930761858
Replicate 217.307761153975
Replicate 319.315951702702
Condition 2: 8 Hour
Replicate 120.449006131618
Replicate 219.943489209706
Replicate 327.374591151827
Condition 3: 24 Hour
Replicate 124.012625397626
Replicate 222.949391007763
Replicate 321.236989142152


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12249.p1 GENE.R_Transcript_12249~~R_Transcript_12249.p1 ORF type:complete len:370 (+),score=73.85,Radical_SAM|PF04055.17|2.8e-17,LIAS_N|PF16881.1|2.5e-09 R_Transcript_12249:271-1380(+)
ATGAATCAAGCCATTGCAAAACCTTCAATGTCGATCCCCATACCAAAATGGACAATACCCAGAAGAAGAATAAGGTGCGAAGTTGCCCCTTTAAGAAGCTCCAAAGAGTCGGCAGCAATGGGGGTAAAAGGGGGGCAGTTGCTGGAGTCACAGAAGATGGGCCCCTATTATCCAGGTGGGATGGGCCCTCACACGGGCCGCGACCCGAATGTGAAGAAGCCCGAGTGGTTAAGGCAGAAGGCTCCTCAGGGACAGAGGTTTGAGGAGGTGAAAGGATCCCTTTCTCAGTTGAAGCTTCATACTGTTTGCCAGGAAGCCCAGTGCCCAAACATTGGAGAGTGTTGGAACGGGGGTGGGGATGGAATTGCAACTGCCACTATCATGCTTCTTGGTGATACTTGCACTCGTGGCTGCAGATTCTGTGCCGTCAAAACAAGCAGGAACCCTGCACCACCTGACCCAATGGAACCAGAGAATACCGCGAAGGCTATTGCAAGTTGGGGTGTTGATTACATTGTATTAACAAGCGTTGATCGGGATGATTTACCTGATGGTGGAAGTGGTCATTTTGCTCAAACAGTCAAAACCATGAAGAAACTCAAGCCTGAAATCATGGTTGAATGCTTGACTTCTGATTTTAGGGGAGACTTAAAGGCTGTAGATACTCTTGTTCACTCAGGATTAGATGTTTTTGCTCACAACATTGAAACTGTTAAACGGCTACAGCGCATCGTCAGAGATCCTCGGGCAGGGTACGAACAGAGCTTGTCTGTCCTGAAGCATGCAAAAAGTAGCAAGGAAGGGATGATTACTAAAACTTCCATTATGCTAGGACTTGGAGAAACTGATGATGAGCTAAAAGAAGCCATGGCTGATCTACGGGCCATTGATGTCGATATTCTGACACTTGGGCAGTATTTACAGCCAACTCCATTGCATCTTACTGTTAAGGAGTATGTTACTCCAGAGAAATTTGCGTTCTGGAAGGATTATGGAGAAGCTATAGGCTTCCGCTATGTTGCTAGTGGGCCCTTGGTACGATCATCTTACCGGGCTGGAGAGCTCTTTGTGCAGACCATGGTGAAAGAAAGGGCTAAAAGCTCCACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12249.p1 GENE.R_Transcript_12249~~R_Transcript_12249.p1 ORF type:complete len:370 (+),score=73.85,Radical_SAM|PF04055.17|2.8e-17,LIAS_N|PF16881.1|2.5e-09 R_Transcript_12249:271-1380(+)
MNQAIAKPSMSIPIPKWTIPRRRIRCEVAPLRSSKESAAMGVKGGQLLESQKMGPYYPGGMGPHTGRDPNVKKPEWLRQKAPQGQRFEEVKGSLSQLKLHTVCQEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFAQTVKTMKKLKPEIMVECLTSDFRGDLKAVDTLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLSVLKHAKSSKEGMITKTSIMLGLGETDDELKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKDYGEAIGFRYVASGPLVRSSYRAGELFVQTMVKERAKSST*

Click here to download the sequence:
Link to NCBI Protein BLAST