Transcript Information: R_Transcript_12257.p1


Annotated TAIR IDAT4G35850.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16983638-16986681 | Forward length=444
E-Value5.4E-206
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 133.122990245732
Replicate 224.887671776549
Replicate 330.137988772127
Condition 2: 8 Hour
Replicate 126.779856367965
Replicate 231.651350060334
Replicate 336.56200184025
Condition 3: 24 Hour
Replicate 140.865832010211
Replicate 239.753368876091
Replicate 345.51394396196


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12257.p1 GENE.R_Transcript_12257~~R_Transcript_12257.p1 ORF type:5prime_partial len:491 (+),score=98.64,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|0.037,PPR_2|PF13041.2|3.7e-11,PPR_2|PF13041.2|0.02,PPR_2|PF13041.2|2.5e+02,PPR_2|PF13041.2|80,PPR_2|PF13041.2|4.6e+02,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|7.9,PPR_3|PF13812.2|2.2e+02,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.68,PPR|PF01535.16|43,PPR|PF01535.16|43,PPR|PF01535.16|1.3e+04,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.00042,PPR_1|PF12854.3|4.6,PPR_1|PF12854.3|8.1e+03 R_Transcript_12257:2-1474(+)
CCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCAACCACCCCCCCCCAACCCCCACCCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAAGACAGATCCGAAACTCGCCTACTTCACTCTTGTCGTCGGAAACAATGAAGCTTTTACAATCTATCAATAGACGTGGGAGAGCACTTCTTCAGGCTGTAGGACGGCGCTACTATGCAGCCCAAACAGAGGAATACTTGAAGCGAAACTACGCCAACAATGTCTCCGAGTACAACACTGTTGTGGGCTCTCTCACTTCCCAGCGCAGGCATTTCTTATTGAGGGATGTGTACGAAGATATGATGCTTGATGGGGTTCAGCCAACAAGGGACGTCTTTCATTCTTTGATTGTTGGGGCGATGAAAGGCACTCGCTTGCCGGACGCCTTCTTCTTTAGAGATCAAATGAAAGCAATGGGTCTGCTTCCTGATGTAGCTCTCTACAATTTCCTCATTTCCACCTGTGGAAAATGCAAGAATTCTGAAAATGCAGTTCAAATATTGGAAGAGATGAAGAGAAATGAAGTCAAGCCAACTGGCCAAACCTACATTTGTCTCCTTAATGCATTTGCAGCAACTGGAAGATTAGATGGAGTGTATGCCATTGTCCGTGATATGACTGCAGCTGGTCTTGGCTTGAACAAGTTCTGTTATGCTGGCCTTATTGTTGCACATAAGAACAGGATGCCTTTAGCAGATGATACAGCTAGCAAAATTCTGGAGCTTGTTGAGCAGTCCAAAGGATGGTCATCTGCAGATATGCCATCTGATATGGCTGAAAATGCTATGATGGGTGTTTCTCAAGAAGAATTATACAATATTTCCACTGCAAATTATTTGAATAGGCGTGGTGGATTTGTTGATAGGCGGTTAACTGTTTATCATGTGGCAATTCATGCTCTTGCGGATCTTCGTGATGTAGAGGCAATGGAGAAACTGTTGAAAATGCTTGAGAACGATAATAGAAACCCTGATGGGTTCATTATGATGCACGTTATGAGGTGCTACTTGCATGCTGGGGACATTGATTGTGGTCAGAAAGTATTTGAGGATTATATGAATTCTGGAAAGCCACCATTTATCGAATTATTTGTGACTCTTGTAGAGGGAGCCATGGCGGGTTATACGCCTAAAGGCATGCAACTTGCTCAAGATACACTGGTAAAAATGAACTCCAGGAACTTCTTCTTGGGCCCAAGAATGGGTAGTGATCTATTATTCATTGCAGCTGGTGAAAAGACCGGTGGATATACGACAGCTAACTATCTGTGGGACCTGATGCAAGCTCGGAATATTATCCCTACTCCACCTGCTGTGGAAGCTTATTATAAGGGTTTGAAAGAACGTGACATACCTGCGGATGATCCACGGTTGCGGAAAGTTGCTGAGATTTATGACAATTTACGACCAAGATTCATTGGACGGCCTCAAATGCGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12257.p1 GENE.R_Transcript_12257~~R_Transcript_12257.p1 ORF type:5prime_partial len:491 (+),score=98.64,PPR_2|PF13041.2|1.4,PPR_2|PF13041.2|0.037,PPR_2|PF13041.2|3.7e-11,PPR_2|PF13041.2|0.02,PPR_2|PF13041.2|2.5e+02,PPR_2|PF13041.2|80,PPR_2|PF13041.2|4.6e+02,PPR_3|PF13812.2|4.4,PPR_3|PF13812.2|0.0017,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|7.9,PPR_3|PF13812.2|2.2e+02,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|3.5e+02,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.68,PPR|PF01535.16|43,PPR|PF01535.16|43,PPR|PF01535.16|1.3e+04,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.00042,PPR_1|PF12854.3|4.6,PPR_1|PF12854.3|8.1e+03 R_Transcript_12257:2-1474(+)
PPPPPPPLPPPTTPPQPPPPTPTPTPTPTPTPRQIRNSPTSLLSSETMKLLQSINRRGRALLQAVGRRYYAAQTEEYLKRNYANNVSEYNTVVGSLTSQRRHFLLRDVYEDMMLDGVQPTRDVFHSLIVGAMKGTRLPDAFFFRDQMKAMGLLPDVALYNFLISTCGKCKNSENAVQILEEMKRNEVKPTGQTYICLLNAFAATGRLDGVYAIVRDMTAAGLGLNKFCYAGLIVAHKNRMPLADDTASKILELVEQSKGWSSADMPSDMAENAMMGVSQEELYNISTANYLNRRGGFVDRRLTVYHVAIHALADLRDVEAMEKLLKMLENDNRNPDGFIMMHVMRCYLHAGDIDCGQKVFEDYMNSGKPPFIELFVTLVEGAMAGYTPKGMQLAQDTLVKMNSRNFFLGPRMGSDLLFIAAGEKTGGYTTANYLWDLMQARNIIPTPPAVEAYYKGLKERDIPADDPRLRKVAEIYDNLRPRFIGRPQMR*

Click here to download the sequence:
Link to NCBI Protein BLAST