Transcript Information: R_Transcript_12260.p1


Annotated TAIR IDAT4G35850.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16983638-16986681 | Forward length=444
E-Value8.4E-204
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24477150705562
Replicate 21.407797920633
Replicate 30.74600486424251
Condition 2: 8 Hour
Replicate 10.7974323833394
Replicate 21.0709234598269
Replicate 30.66069080802175
Condition 3: 24 Hour
Replicate 10.61572663062808
Replicate 20.33801163050693
Replicate 30.25158281249307


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12260.p1 GENE.R_Transcript_12260~~R_Transcript_12260.p1 ORF type:5prime_partial len:522 (+),score=98.52,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|4.1e-11,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|2.7e+02,PPR_2|PF13041.2|86,PPR_2|PF13041.2|4.9e+02,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|2.4e+02,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|3.8e+02,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.73,PPR|PF01535.16|46,PPR|PF01535.16|47,PPR|PF01535.16|1.4e+04,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.00046,PPR_1|PF12854.3|5,PPR_1|PF12854.3|8.7e+03 R_Transcript_12260:2-1567(+)
CCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCAACCACCCCCCCCCAACCCCCACCCCCAACCCCAACCCCAACCCCAACCCCAACCCCAACCCCAAGACAGATCCGAAACTCGCCTACTTCACTCTTGTCGTCGGAAACAATGAAGCTTTTACAATCTATCAATAGTAAGCAGGAAGAACTTCGAAATTCTTCCCCCTCAAAAAAAAAAAAAAAAAATCCATTTACAAGATGTCTCAAAATTTTTTTCCATTTTTCAGGACGTGGGAGAGCACTTCTTCAGGCTGTAGGACGGCGCTACTATGCAGCCCAAACAGAGGAATACTTGAAGCGAAACTACGCCAACAATGTCTCCGAGTACAACACTGTTGTGGGCTCTCTCACTTCCCAGCGCAGGCATTTCTTATTGAGGGATGTGTACGAAGATATGATGCTTGATGGGGTTCAGCCAACAAGGGACGTCTTTCATTCTTTGATTGTTGGGGCGATGAAAGGCACTCGCTTGCCGGACGCCTTCTTCTTTAGAGATCAAATGAAAGCAATGGGTCTGCTTCCTGATGTAGCTCTCTACAATTTCCTCATTTCCACCTGTGGAAAATGCAAGAATTCTGAAAATGCAGTTCAAATATTGGAAGAGATGAAGAGAAATGAAGTCAAGCCAACTGGCCAAACCTACATTTGTCTCCTTAATGCATTTGCAGCAACTGGAAGATTAGATGGAGTGTATGCCATTGTCCGTGATATGACTGCAGCTGGTCTTGGCTTGAACAAGTTCTGTTATGCTGGCCTTATTGTTGCACATAAGAACAGGATGCCTTTAGCAGATGATACAGCTAGCAAAATTCTGGAGCTTGTTGAGCAGTCCAAAGGATGGTCATCTGCAGATATGCCATCTGATATGGCTGAAAATGCTATGATGGGTGTTTCTCAAGAAGAATTATACAATATTTCCACTGCAAATTATTTGAATAGGCGTGGTGGATTTGTTGATAGGCGGTTAACTGTTTATCATGTGGCAATTCATGCTCTTGCGGATCTTCGTGATGTAGAGGCAATGGAGAAACTGTTGAAAATGCTTGAGAACGATAATAGAAACCCTGATGGGTTCATTATGATGCACGTTATGAGGTGCTACTTGCATGCTGGGGACATTGATTGTGGTCAGAAAGTATTTGAGGATTATATGAATTCTGGAAAGCCACCATTTATCGAATTATTTGTGACTCTTGTAGAGGGAGCCATGGCGGGTTATACGCCTAAAGGCATGCAACTTGCTCAAGATACACTGGTAAAAATGAACTCCAGGAACTTCTTCTTGGGCCCAAGAATGGGTAGTGATCTATTATTCATTGCAGCTGGTGAAAAGACCGGTGGATATACGACAGCTAACTATCTGTGGGACCTGATGCAAGCTCGGAATATTATCCCTACTCCACCTGCTGTGGAAGCTTATTATAAGGGTTTGAAAGAACGTGACATACCTGCGGATGATCCACGGTTGCGGAAAGTTGCTGAGATTTATGACAATTTACGACCAAGATTCATTGGACGGCCTCAAATGCGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12260.p1 GENE.R_Transcript_12260~~R_Transcript_12260.p1 ORF type:5prime_partial len:522 (+),score=98.52,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|4.1e-11,PPR_2|PF13041.2|0.021,PPR_2|PF13041.2|2.7e+02,PPR_2|PF13041.2|86,PPR_2|PF13041.2|4.9e+02,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|0.0019,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|8.5,PPR_3|PF13812.2|2.4e+02,PPR|PF01535.16|2.2e+02,PPR|PF01535.16|3.8e+02,PPR|PF01535.16|0.0002,PPR|PF01535.16|0.73,PPR|PF01535.16|46,PPR|PF01535.16|47,PPR|PF01535.16|1.4e+04,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.00046,PPR_1|PF12854.3|5,PPR_1|PF12854.3|8.7e+03 R_Transcript_12260:2-1567(+)
PPPPPPPLPPPTTPPQPPPPTPTPTPTPTPTPRQIRNSPTSLLSSETMKLLQSINSKQEELRNSSPSKKKKKNPFTRCLKIFFHFSGRGRALLQAVGRRYYAAQTEEYLKRNYANNVSEYNTVVGSLTSQRRHFLLRDVYEDMMLDGVQPTRDVFHSLIVGAMKGTRLPDAFFFRDQMKAMGLLPDVALYNFLISTCGKCKNSENAVQILEEMKRNEVKPTGQTYICLLNAFAATGRLDGVYAIVRDMTAAGLGLNKFCYAGLIVAHKNRMPLADDTASKILELVEQSKGWSSADMPSDMAENAMMGVSQEELYNISTANYLNRRGGFVDRRLTVYHVAIHALADLRDVEAMEKLLKMLENDNRNPDGFIMMHVMRCYLHAGDIDCGQKVFEDYMNSGKPPFIELFVTLVEGAMAGYTPKGMQLAQDTLVKMNSRNFFLGPRMGSDLLFIAAGEKTGGYTTANYLWDLMQARNIIPTPPAVEAYYKGLKERDIPADDPRLRKVAEIYDNLRPRFIGRPQMR*

Click here to download the sequence:
Link to NCBI Protein BLAST