Transcript Information: R_Transcript_122648.p2


Annotated TAIR IDAT5G01110.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:42114-44303 | Reverse length=729
E-Value4E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38027001988997
Replicate 20
Replicate 30.39768641659987
Condition 2: 8 Hour
Replicate 10.34008145760063
Replicate 20.23292585251235
Replicate 30
Condition 3: 24 Hour
Replicate 10.79714608429528
Replicate 20
Replicate 30.37999487303641


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122648.p2 GENE.R_Transcript_122648~~R_Transcript_122648.p2 ORF type:5prime_partial len:288 (+),score=30.66,PPR|PF01535.16|7.5,PPR|PF01535.16|8.7e+03,PPR|PF01535.16|0.06,PPR|PF01535.16|0.099,PPR_2|PF13041.2|5.4,PPR_2|PF13041.2|31,PPR_2|PF13041.2|0.063 R_Transcript_122648:3-866(+)
TCGGTTCGGGTCTGTTCAAATGACATAGCTCCCGTCGATTCCATCACTCCAGTCCGCTGGCGCTCAGTGCTTCCCCTCCCATGTCGCTTTTCAAAGGAAGCTGCTGAGAGTGGCGGTGGCCTCATTACAAAACCCACTTCAGGAAAAAAATTAGAAAAAGAAATGGCTACTCAACGTCTAATTTCACAACCATGTGTAAGAAGAACCCTATTCCAAACTCAATCCCTTTGCACATCCTCATACCTTCAACAACCCTCACCAATAATTTCACCAAAACCCATTTCAGCAACATCACTATCTGACTCCCTAACGGTGGAAAAAGTCCTGCTAAATTTGAAACTGGGTAAGTCCACTTTCTTCCAGAAGAACAGCAAAATTTACTCTCTATTAACCCCTTTTGATGTTGCCCAAGTTTTGTACCAATGTCATGAAAATCCCCTGCTGGGGTTATACTTTATTGATTTAATATCATCAAATTGTCCAAATTACCAACATTCTATGACTTCTTTGTGTGCTATGGTTCATATGTTGGTTAAGGGTAGGAGGGTATCACAAGCTCAGGCTTTGATTCTTAGAATGGTTAGGAAAAGTGGGGTTTCAAGGGTTGAAGTTGTGGATTCTTTGGTGGGTAGTTTTAGTAAATGTGGTTCTGATTTGGGTGTATTTGATTTGTTGGTTAGGACTTATGTGCAAGCTAGGAGGTTGAGAGAGGCTTCTGAGGTGTTTAAGTTGTTGATAAGTAGAGGGTTTTGCGTCTCGATTAACGCTTGTAATTGTCTTCTTGGTGGGTTAGTTAAGGTTGGGTGGGTTGATTTAGCATGGGAGGTGTATGGAGAGGTTGTGTTAAGTGTGGCTCTCGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122648.p2 GENE.R_Transcript_122648~~R_Transcript_122648.p2 ORF type:5prime_partial len:288 (+),score=30.66,PPR|PF01535.16|7.5,PPR|PF01535.16|8.7e+03,PPR|PF01535.16|0.06,PPR|PF01535.16|0.099,PPR_2|PF13041.2|5.4,PPR_2|PF13041.2|31,PPR_2|PF13041.2|0.063 R_Transcript_122648:3-866(+)
SVRVCSNDIAPVDSITPVRWRSVLPLPCRFSKEAAESGGGLITKPTSGKKLEKEMATQRLISQPCVRRTLFQTQSLCTSSYLQQPSPIISPKPISATSLSDSLTVEKVLLNLKLGKSTFFQKNSKIYSLLTPFDVAQVLYQCHENPLLGLYFIDLISSNCPNYQHSMTSLCAMVHMLVKGRRVSQAQALILRMVRKSGVSRVEVVDSLVGSFSKCGSDLGVFDLLVRTYVQARRLREASEVFKLLISRGFCVSINACNCLLGGLVKVGWVDLAWEVYGEVVLSVALG*

Click here to download the sequence:
Link to NCBI Protein BLAST