Transcript Information: R_Transcript_122649.p1


Annotated TAIR IDAT5G01110.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:42114-44303 | Reverse length=729
E-Value1.5E-290
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6338967606526
Replicate 21.0202805828892
Replicate 31.4646251659944
Condition 2: 8 Hour
Replicate 10.84541988948289
Replicate 21.1723736003691
Replicate 31.9497893761029
Condition 3: 24 Hour
Replicate 12.1724779218032
Replicate 21.5512010728667
Replicate 31.259522648223


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122649.p1 GENE.R_Transcript_122649~~R_Transcript_122649.p1 ORF type:complete len:782 (+),score=95.83,PPR_2|PF13041.2|19,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|2e-14,PPR_2|PF13041.2|5.9e-10,PPR_2|PF13041.2|2e-07,PPR_2|PF13041.2|1.3e-13,PPR_2|PF13041.2|8.2e-16,PPR_2|PF13041.2|1.4e-20,PPR_2|PF13041.2|3.9e-13,PPR_2|PF13041.2|5.9e-22,PPR_2|PF13041.2|3.6e-13,PPR_2|PF13041.2|5.7e-13,PPR_2|PF13041.2|1.1e-16,PPR_2|PF13041.2|2.4e-15,PPR_2|PF13041.2|8.5e-08,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|7e-07,PPR_1|PF12854.3|7.8e-09,PPR_1|PF12854.3|4.2,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|1.1e-08,PPR_1|PF12854.3|3.2e-13,PPR_1|PF12854.3|3.5e-14,PPR_1|PF12854.3|1e-14,PPR_1|PF12854.3|5.4e-12,PPR_1|PF12854.3|2.3e-10,PPR_1|PF12854.3|1.8e-08,PPR_1|PF12854.3|2.3e-07,PPR_1|PF12854.3|5.5e-07,PPR|PF01535.16|26,PPR|PF01535.16|0.22,PPR|PF01535.16|0.074,PPR|PF01535.16|0.00012,PPR|PF01535.16|9.7e-07,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|0.02,PPR|PF01535.16|2.8e-06,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|1e-07,PPR|PF01535.16|5.6e-09,PPR|PF01535.16|9.4e-10,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|6.8e-05,PPR|PF01535.16|1.6e-07,PPR_3|PF13812.2|4.4e+02,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|97,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|3.6e-06,PPR_3|PF13812.2|5.3e-06,PPR_3|PF13812.2|4.2e-05,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|0.0029,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.011,MRP-S27|PF10037.5|47,MRP-S27|PF10037.5|2.5,MRP-S27|PF10037.5|1.1e+03,MRP-S27|PF10037.5|2.6e+02,MRP-S27|PF10037.5|0.27,MRP-S27|PF10037.5|49,MRP-S27|PF10037.5|1.3,MRP-S27|PF10037.5|0.0033,ATP13|PF12921.3|3.7e+03,ATP13|PF12921.3|0.9,ATP13|PF12921.3|1.6e+03,ATP13|PF12921.3|3.2,ATP13|PF12921.3|65,ATP13|PF12921.3|9.8e+02,ATP13|PF12921.3|1.7e+03,ATP13|PF12921.3|5.1e+02,ATP13|PF12921.3|75,AEP1|PF17049.1|6.5,AEP1|PF17049.1|5.1e+03,AEP1|PF17049.1|0.88,AEP1|PF17049.1|4.1e+02,AEP1|PF17049.1|1.3e+03,AEP1|PF17049.1|80,AEP1|PF17049.1|2.2e+02 R_Transcript_122649:165-2348(+)
ATGGCTACTCAACGTCTAATTTCACAACCATGTGTAAGAAGAACCCTATTCCAAACTCAATCCCTTTGCACATCCTCATACCTTCAACAACCCTCACCAATAATTTCACCAAAACCCATTTCAGCAACATCACTATCTGACTCCCTAACGGTGGAAAAAGTCCTGCTAAATTTGAAACTGGGTAAGTCCACTTTCTTCCAGAAGAACAGCAAAATTTACTCTCTATTAACCCCTTTTGATGTTGCCCAAGTTTTGTACCAATGTCATGAAAATCCCCTGCTGGGGTTATACTTTATTGATTTAATATCATCAAATTGTCCAAATTACCAACATTCTATGACTTCTTTGTGTGCTATGGTTCATATGTTGGTTAAGGGTAGGAGGGTATCACAAGCTCAGGCTTTGATTCTTAGAATGGTTAGGAAAAGTGGGGTTTCAAGGGTTGAAGTTGTGGATTCTTTGGTGGGTAGTTTTAGTAAATGTGGTTCTGATTTGGGTGTATTTGATTTGTTGGTTAGGACTTATGTGCAAGCTAGGAGGTTGAGAGAGGCTTCTGAGGTGTTTAAGTTGTTGATAAGTAGAGGGTTTTGCGTCTCGATTAACGCTTGTAATTGTCTTCTTGGTGGGTTAGTTAAGGTTGGGTGGGTTGATTTAGCATGGGAGGTGTATGGAGAGGTTGTTAAGTATGGCGCTCGGGTGAACATTTACACGGTTAATATCATGGTTAATGCATTGTGTAAGGATGGTAAGATAGCAAAAGTGGATTCGTTTTTGTTGGAAATGGAAGCAAAGGGAGTGTTTCTCGACAATGTGACTTATAGTACACTTATTAATGCTTATCTCCGAGAGGGTAATGTGCAAAAAGGTTTTGAATTGATGAGGTTGATGTCGAGTAAAGGGTTGAGGCCGGGCCTGTTCACTTATAATTCGATGTTAAAAGGGCTGTGTAGGGTGGGAAGATATGGTAGGGCAAAGCAAATGTTGAGTGAGATGTGGGAGATTGGGTTGATGCCAGATACTACTAGTTATAATGCATTACTGCTTGAGTGTAGCAGAAAAGATAATACAGTGGATGGTGAACAACTATTTAATGAAATGTTGTATCGTGGTGTCGTTCCTGATTTAGTTAGTTTTACGTCACTGGTTGCGATGTTCTCGAGAAACGGACATCTTGATCGAGCCTTGATGTATTTTAAGGAGATGAAGGCCAAGGGGTTGGCTCCAGATAGTGTTGTTTATACAATTCTCATTGGTGGGTTCTGTAAAATTGGTGTTATGACCGAGGCCTTAAGAATACGCGATGAAATGCTTGAGCAAGGTTGTGTTATGGATGTGGTAACTTACAACACCATTTTGGATGGGTTGTGCAAGGAAAACTTACTTTCCGATGCCGATAAGCTTCTTGATGAGATGACTCAAAGAGGTGTCCAGCCTGATTACTATACTTATACAACGCTTATACATGGTTATTGTAAAGCTGGGAACATGAACAAAGCAGTGGTATTGTTTGAGACTATGATTCAGAAGAATCTGAAACCTGATATTGTCACATATAATACTATAATTGATGGTTTCTGCAAGGAGGGTTCCATGGACAAAGCATACGAATTATGGAGAGACATGGTTCGTCATAATATCACCCCTAATCACATTTCTTATAGTATCCTCATTAACGGTTTTTGTAGTACAGGGCACCTCAATGATGCATTCAGGTTGTGGGATGAGATGGTTAATAAAGGTATTGATCCAACCAACGTGACTTGTAACACCATCATTAAAGGCTATTGCAGATCTGGAGATCCAGCAACAGCAGAGGAGTTCCTCAGCAAGATGACAGTGAAGGGCTTTCTTCCTGATAGCATTACGTACAATACTCTAATTTATGGATTCATAAAAGAAGAGAATATGGACAAAGCTTTTATCTTGCTTAATAAAATGGAGGACCAAGGAATATTTCCTGACATAATAACATATAATGTGATACTAGAAGGTTTTTGTAGACAAGCTAGAATGGAAGAGGCAAACTTGATATACAAGAAGATGACAGAAAGGGGTATGAATCCCGACAGAACAACATATACATCATTAATCAATGGTTATGTCAGTCAGGACAATCTGAAGGAGGCTTTTAGGTTCCATGATGAAATGCTTAAAAGGGGTTTTGTGCCAGATGATAAATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122649.p1 GENE.R_Transcript_122649~~R_Transcript_122649.p1 ORF type:complete len:782 (+),score=95.83,PPR_2|PF13041.2|19,PPR_2|PF13041.2|1.1e+02,PPR_2|PF13041.2|1.1e-09,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|2e-14,PPR_2|PF13041.2|5.9e-10,PPR_2|PF13041.2|2e-07,PPR_2|PF13041.2|1.3e-13,PPR_2|PF13041.2|8.2e-16,PPR_2|PF13041.2|1.4e-20,PPR_2|PF13041.2|3.9e-13,PPR_2|PF13041.2|5.9e-22,PPR_2|PF13041.2|3.6e-13,PPR_2|PF13041.2|5.7e-13,PPR_2|PF13041.2|1.1e-16,PPR_2|PF13041.2|2.4e-15,PPR_2|PF13041.2|8.5e-08,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|7e-07,PPR_1|PF12854.3|7.8e-09,PPR_1|PF12854.3|4.2,PPR_1|PF12854.3|1.1e-06,PPR_1|PF12854.3|1.1e-08,PPR_1|PF12854.3|3.2e-13,PPR_1|PF12854.3|3.5e-14,PPR_1|PF12854.3|1e-14,PPR_1|PF12854.3|5.4e-12,PPR_1|PF12854.3|2.3e-10,PPR_1|PF12854.3|1.8e-08,PPR_1|PF12854.3|2.3e-07,PPR_1|PF12854.3|5.5e-07,PPR|PF01535.16|26,PPR|PF01535.16|0.22,PPR|PF01535.16|0.074,PPR|PF01535.16|0.00012,PPR|PF01535.16|9.7e-07,PPR|PF01535.16|1.5e-06,PPR|PF01535.16|0.02,PPR|PF01535.16|2.8e-06,PPR|PF01535.16|4.3e-06,PPR|PF01535.16|1e-07,PPR|PF01535.16|5.6e-09,PPR|PF01535.16|9.4e-10,PPR|PF01535.16|1.1e-07,PPR|PF01535.16|1.4e-06,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|6.8e-05,PPR|PF01535.16|1.6e-07,PPR_3|PF13812.2|4.4e+02,PPR_3|PF13812.2|3.3e+02,PPR_3|PF13812.2|97,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.0016,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.00014,PPR_3|PF13812.2|0.26,PPR_3|PF13812.2|1.9e-05,PPR_3|PF13812.2|3.6e-06,PPR_3|PF13812.2|5.3e-06,PPR_3|PF13812.2|4.2e-05,PPR_3|PF13812.2|0.0022,PPR_3|PF13812.2|0.0029,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.011,MRP-S27|PF10037.5|47,MRP-S27|PF10037.5|2.5,MRP-S27|PF10037.5|1.1e+03,MRP-S27|PF10037.5|2.6e+02,MRP-S27|PF10037.5|0.27,MRP-S27|PF10037.5|49,MRP-S27|PF10037.5|1.3,MRP-S27|PF10037.5|0.0033,ATP13|PF12921.3|3.7e+03,ATP13|PF12921.3|0.9,ATP13|PF12921.3|1.6e+03,ATP13|PF12921.3|3.2,ATP13|PF12921.3|65,ATP13|PF12921.3|9.8e+02,ATP13|PF12921.3|1.7e+03,ATP13|PF12921.3|5.1e+02,ATP13|PF12921.3|75,AEP1|PF17049.1|6.5,AEP1|PF17049.1|5.1e+03,AEP1|PF17049.1|0.88,AEP1|PF17049.1|4.1e+02,AEP1|PF17049.1|1.3e+03,AEP1|PF17049.1|80,AEP1|PF17049.1|2.2e+02 R_Transcript_122649:165-2348(+)
MATQRLISQPCVRRTLFQTQSLCTSSYLQQPSPIISPKPISATSLSDSLTVEKVLLNLKLGKSTFFQKNSKIYSLLTPFDVAQVLYQCHENPLLGLYFIDLISSNCPNYQHSMTSLCAMVHMLVKGRRVSQAQALILRMVRKSGVSRVEVVDSLVGSFSKCGSDLGVFDLLVRTYVQARRLREASEVFKLLISRGFCVSINACNCLLGGLVKVGWVDLAWEVYGEVVKYGARVNIYTVNIMVNALCKDGKIAKVDSFLLEMEAKGVFLDNVTYSTLINAYLREGNVQKGFELMRLMSSKGLRPGLFTYNSMLKGLCRVGRYGRAKQMLSEMWEIGLMPDTTSYNALLLECSRKDNTVDGEQLFNEMLYRGVVPDLVSFTSLVAMFSRNGHLDRALMYFKEMKAKGLAPDSVVYTILIGGFCKIGVMTEALRIRDEMLEQGCVMDVVTYNTILDGLCKENLLSDADKLLDEMTQRGVQPDYYTYTTLIHGYCKAGNMNKAVVLFETMIQKNLKPDIVTYNTIIDGFCKEGSMDKAYELWRDMVRHNITPNHISYSILINGFCSTGHLNDAFRLWDEMVNKGIDPTNVTCNTIIKGYCRSGDPATAEEFLSKMTVKGFLPDSITYNTLIYGFIKEENMDKAFILLNKMEDQGIFPDIITYNVILEGFCRQARMEEANLIYKKMTERGMNPDRTTYTSLINGYVSQDNLKEAFRFHDEMLKRGFVPDDKF*

Click here to download the sequence:
Link to NCBI Protein BLAST