Transcript Information: R_Transcript_122706.p2


Annotated TAIR IDAT3G49920.1
Annotated Gene Namevoltage dependent anion channel 5
Annotated Gene Symbol(s)VDAC5, ATVDAC5
Annotation TypeHomolog
Chromosome Positionchr3:18505836-18507699 | Reverse length=226
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.512851358636
Replicate 214.597427908474
Replicate 316.580114831501
Condition 2: 8 Hour
Replicate 117.256704819963
Replicate 222.786803400065
Replicate 315.212778424705
Condition 3: 24 Hour
Replicate 118.147599999042
Replicate 216.804006773773
Replicate 320.220070044086


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122706.p2 GENE.R_Transcript_122706~~R_Transcript_122706.p2 ORF type:complete len:105 (-),score=14.78,Porin_3|PF01459.18|3.3e-15 R_Transcript_122706:2393-2707(-)
ATGAATTCCAGGGCCGAGAAAGGTGACCTGCTTGAGGCATCGTACCTATATTACCTTGATCAAGTGCGGACCACTACAGTAGTGGAATTTACTAACAGGTTCTCTGAAGAGGGAAAGACTTTGACCGTTGGAGGATCATATGCAGTGGATGACTTAACCCTTATTAAGCTTAAACTTGATAATCAAGGAAGTTTTGGAGCTCTTCTGCAACACGAGTTTAAACCTAAATCGGTACTGACAATGGCAGCAGAGTTTGATTACAATTCTATTGACACAAACCCAAAATTTGGCCTATCACTTGCATTGAAGCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122706.p2 GENE.R_Transcript_122706~~R_Transcript_122706.p2 ORF type:complete len:105 (-),score=14.78,Porin_3|PF01459.18|3.3e-15 R_Transcript_122706:2393-2707(-)
MNSRAEKGDLLEASYLYYLDQVRTTTVVEFTNRFSEEGKTLTVGGSYAVDDLTLIKLKLDNQGSFGALLQHEFKPKSVLTMAAEFDYNSIDTNPKFGLSLALKP*

Click here to download the sequence:
Link to NCBI Protein BLAST