Transcript Information: R_Transcript_122766.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value5E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4950090513644
Replicate 21.359472688825
Replicate 32.6697061083286
Condition 2: 8 Hour
Replicate 12.6423595266811
Replicate 22.3808708722989
Replicate 34.1526706311389
Condition 3: 24 Hour
Replicate 12.6095924762426
Replicate 21.6819118290656
Replicate 32.6139273223201


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122766.p1 GENE.R_Transcript_122766~~R_Transcript_122766.p1 ORF type:5prime_partial len:695 (+),score=78.19,RVT_1|PF00078.23|1.3e-36,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|2.2e-17 R_Transcript_122766:2-2086(+)
GTGACGAGTGTTTACAAGATCATCACCAAACTATTGTCGAATCGGCTGGGTGAAGTGTTGCCCTCAACAATTTCCACTTCGCAAGGTGCTTTTGTGGAGGGTAGGCAAATCCTCGATGCGACCCTTGTGGCTAACGAGGTGGTGGATGACGCTCGAAGAACTGGTTTTGAGGGGGTGGTTTTCAAACTTGATTTTGAGAAGGCTTACGATAGGGTTAGTTGGTCATTCCTTGATCGGGTGCTTCAACGGAAGGGCTTTGGGGTGAGATGGAGGCAATGGGTGAGGGGGTGTTTCTCTAATGCTGCTTTCTCTGTCTTGGTTAATGGGGCGCCGAGGGAATGGTTCTCCTCATCCCGCGGGTTACGCCAAGGGGACCCCCTGTCCCCCCTTCTGTTTACACTTGTGGTGGATGTTTTGAGTAGACTGCTCGACAGAGCGGTGGAGAGGGGAGTGGTGGAGGGTTTTGATGTGGGTAGAGAAAGGGTGCAAGTCTCCCATTTGCAGTTTGTCGATGATACCATTTTGTTTCTGGGGGCAGACCTGGAGCGGTTTAAGAATACCCTAACGGTGTTACAAGTGTTTGAGACTGTTTCTGGGATGCGGGTGAACCTTAGTAAGAGTAGTTTGGCTGGAGTGAATGTCAGCCCGGAACGGATGGCTTCTCTTGCCTCCTTAGCGGGTTGTCCAGTACAGAGTTGGCCTTTGGTGTACCTGGGTGTCCCCCTTGGTGGTAACCCACGCTCTGTCTCATTCTGGGACCCGGTCGTGGAAAGGGTGGCGAGCCGGCTGGAGGGTTGGAAAGGTGCCTACTTCTCCCTCGGTGGTCGGATCACTTTGCTGCAGACATGTTTGTCTAATGTCCCCCTATATTATCTGTCCTTGTTTCGTATCCCAAAAGCGGTGGCCAACCGGATCGAGAAGTTGATGCGAGATTTCCTGTGGCAAGGTACCTCTACTGACAAGAGGGACCACTTGGTGAGTTGGGAGACTGTGTGTAAGCCAAAGGAGGAGGGGGGTTTGGGAGTAGGTAGGTTGGTGTTGCGGAATATTGCCCTAGTGGGTAAGTGGTTGTGGCGCTTTCCTTTGGAACCTTCAGCGCTCTGGCATCTAGTAATTCGAAGTCGCTACGGTGTTCCGGGTCTAGGGTGGGACTCATTGGCGACTTCAGGATCTACCCATGCTTCTCCATGGAAGTTTGTCTCCCAGGTTGCTGTGTTCTACCTTCCCCTTATAGGGTTATCCCTGGGTAATGGGAGGAGAATCCGGTTCTGGGAGGATGTATGGAGGGGAGACGTGGCTCTCCAAGTGCGGTTCCCTCGTATATATCATCTCTCTACGCTTCATGAGGCCACTATTTCGCAGTTCTTCGTGGATGGTTCTTGGAACTTGCATTTGAGGAGACCTGCCAGGGATCAGGAGATGGAGGAGATTGTTTCACTGTTGGGAGTACTGGAAGGGGTGGATATTTCTGGAGAGGAGGATAGGCGGTCTTGGAAAGGGGATTCTTCTGAGTCTTTCTCTTGTGCTTCTTTTCTTAGGAGTTTGCAGGGAACAGGTGGTACCCCTTTCCCGCTGGCTAGCATTTGGAAGGTCAAAGCCCCCCTTAAGGTCAGGGCTTTTGTGTGGACCTTGGCATTAGGGAGGGTTAATACTAACGACATGCGGCAACGTCGCCGCCCTCGGTGTTGCCTCTCGCCGGACGTGTGTGTCATGTGTGGTCTTAGCGGGGAGACGGCCTCTCACCTTTTCCTCCACTGTCCAGCGGTGCGGAGTTTGTGGGATAGGTTGTTTGGGATGTGTTGTGAGACCTGGGTGTGTCCTCCTACAGTGTTGGACTTCCTTCACATGCGTTTTTGGTGTTTCGGATTGAATAAGGAGAAAGGTATCCTATGGCGCAATGCGATTTTGGCGACTTTGTGGTGCGTGTGGCTGGAAAGAAATGCCCGTGTGTTTAAGCAGATGTTCCTCCCTACCCATCTGTTGTGGGACCGTGTCACTTTCCTGGCCTCATTATGGAGTAAGGCTGGGGGAGCTTTCGGTAGCTACTCTCTTACTACTATACAACGCAACTGGGCTATCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122766.p1 GENE.R_Transcript_122766~~R_Transcript_122766.p1 ORF type:5prime_partial len:695 (+),score=78.19,RVT_1|PF00078.23|1.3e-36,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|2.2e-17 R_Transcript_122766:2-2086(+)
VTSVYKIITKLLSNRLGEVLPSTISTSQGAFVEGRQILDATLVANEVVDDARRTGFEGVVFKLDFEKAYDRVSWSFLDRVLQRKGFGVRWRQWVRGCFSNAAFSVLVNGAPREWFSSSRGLRQGDPLSPLLFTLVVDVLSRLLDRAVERGVVEGFDVGRERVQVSHLQFVDDTILFLGADLERFKNTLTVLQVFETVSGMRVNLSKSSLAGVNVSPERMASLASLAGCPVQSWPLVYLGVPLGGNPRSVSFWDPVVERVASRLEGWKGAYFSLGGRITLLQTCLSNVPLYYLSLFRIPKAVANRIEKLMRDFLWQGTSTDKRDHLVSWETVCKPKEEGGLGVGRLVLRNIALVGKWLWRFPLEPSALWHLVIRSRYGVPGLGWDSLATSGSTHASPWKFVSQVAVFYLPLIGLSLGNGRRIRFWEDVWRGDVALQVRFPRIYHLSTLHEATISQFFVDGSWNLHLRRPARDQEMEEIVSLLGVLEGVDISGEEDRRSWKGDSSESFSCASFLRSLQGTGGTPFPLASIWKVKAPLKVRAFVWTLALGRVNTNDMRQRRRPRCCLSPDVCVMCGLSGETASHLFLHCPAVRSLWDRLFGMCCETWVCPPTVLDFLHMRFWCFGLNKEKGILWRNAILATLWCVWLERNARVFKQMFLPTHLLWDRVTFLASLWSKAGGAFGSYSLTTIQRNWAIL*

Click here to download the sequence:
Link to NCBI Protein BLAST