Transcript Information: R_Transcript_122788.p2


Annotated TAIR IDAT1G43760.1
Annotated Gene NameDNAse I-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16528880-16531065 | Reverse length=626
E-Value2E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6337853690057
Replicate 22.5436046759833
Replicate 35.7014567144608
Condition 2: 8 Hour
Replicate 14.422557105009
Replicate 23.5462191466197
Replicate 35.7973205725906
Condition 3: 24 Hour
Replicate 18.5965357460566
Replicate 24.7608268089792
Replicate 36.5566692454142


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122788.p2 GENE.R_Transcript_122788~~R_Transcript_122788.p2 ORF type:3prime_partial len:454 (+),score=91.89,RVT_1|PF00078.23|9.2e-16 R_Transcript_122788:3232-4590(+)
ATGAGTGCTTTTGATGAGTTTGTGAGAGAGTGTGGCCTTCGTGATCTTCCTTTGCGTAATGGGCTTTTTACCTGGCATGTGGGGGGTCGGAGGAACATTGCTTCTAGATTAGATAGGTTTTTAGTCACGAATGAGTTTGAGGATGAGTTTCCTTCTCTCTCTCAGGAATTACTGTCTAGGACCTGCTCCGATCATTTCCCTGTTGCTCTTACCTCGGCCACTATTCCTTGGGGCCCTACTCCTTTTCGTTTTGAGAATATGTGGCTTGGTCACCCTGATTTCCGTAACAGGATTAGAGAATGGTGGGGAGAAGGCGGAGAGGTGGGTTGGAAGGGGTTCTCCTTTATGAGTCGTCTTAGTTTTGTCAAGGGTAGGCTCAAAGTTTGGAACAAGGAGGAGTTTGGCGATGTCCGGGCTAGGAAGGCAGAGTTGTTGAGAGAATGTTTGGAAGTGGAAAAGAGTTTAGCGGAGGGTAGTGTGGAGGTGGGGGTTTTTCAGCGGAGTTTGGAGCTAAGGAGGGAATTGGAGGAGGTGCTTTTGAGGGAGAAACAGAGTCAGCAGCAGAAGATGAAATTTAAGTGGGCTAAGGAAGGGGATGCTTCCTCGAGGATTTTCTTTAAGGTAGTTAATGGACGTCGTCGCCGGAATTTTATCAAGGAGTTGGAGACCTCGGATGGAGAGGTGGTGTCTAATGTTAGACGTGTTAGTGAGGAGATTACCGGTTTTTATAAGAGTTTGTTTGAGGAGGAGATGCAGGACCGGCCTATGATTAGGGGACTTGATTGGTCTCCAATTTCTTTTCCCTCCCGAGAGGGTCTGGAGAGACCTTTCGAGCTAGAGGAAATTAGGGCTGCTGTGTTTGGGATGGATAGGGAAAAGTCACCAGGCCCTGATGGATTTAACATGGCTTTCTTTCAAGACTGTTGGGATATCATTAAAGAGGATCTCTTGGGTGTTTTTCAAGAATTCTATGACACTGGGGTCTTGTGTAAGAGATTGAATTCCACCTTCATTACCCTAGTTCCCAAGAAGGATCGCTCGGTCCAGGTGCGGGATTTTAGACCTATTAGTTTGGTGACGAGTGTCTATAAGATCATCACTAAAGTCTTGTCTGTTCGCATGGGGGCAGTGTTGGGTGAAACCATCTCTAAAGCCCAAAGTGCCTTTGTGGGGGAGCGTCAAATTCTAGATGCGTCTTTAGTGGCTAACGAAGTGGTTGATGACGCTAGAAGAACTGGTTTCAAGGGGGTGGTCTTTAAACTGGACTTTGAGAAGGCTTATGATAGGGTGTCCTGGGGCTTTTTGGATAAGGTGTTGGAGGCTAAGGGCTTTGGTGAGCGGTGGCGTAAGTGGACTCGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122788.p2 GENE.R_Transcript_122788~~R_Transcript_122788.p2 ORF type:3prime_partial len:454 (+),score=91.89,RVT_1|PF00078.23|9.2e-16 R_Transcript_122788:3232-4590(+)
MSAFDEFVRECGLRDLPLRNGLFTWHVGGRRNIASRLDRFLVTNEFEDEFPSLSQELLSRTCSDHFPVALTSATIPWGPTPFRFENMWLGHPDFRNRIREWWGEGGEVGWKGFSFMSRLSFVKGRLKVWNKEEFGDVRARKAELLRECLEVEKSLAEGSVEVGVFQRSLELRRELEEVLLREKQSQQQKMKFKWAKEGDASSRIFFKVVNGRRRRNFIKELETSDGEVVSNVRRVSEEITGFYKSLFEEEMQDRPMIRGLDWSPISFPSREGLERPFELEEIRAAVFGMDREKSPGPDGFNMAFFQDCWDIIKEDLLGVFQEFYDTGVLCKRLNSTFITLVPKKDRSVQVRDFRPISLVTSVYKIITKVLSVRMGAVLGETISKAQSAFVGERQILDASLVANEVVDDARRTGFKGVVFKLDFEKAYDRVSWGFLDKVLEAKGFGERWRKWTR

Click here to download the sequence:
Link to NCBI Protein BLAST