Transcript Information: R_Transcript_122816.p1


Annotated TAIR IDAT1G63000.1
Annotated Gene Namenucleotide-rhamnose synthase/epimerase-reductase
Annotated Gene Symbol(s)NRS/ER, UER1
Annotation TypeOrtholog
Chromosome Positionchr1:23342510-23343859 | Forward length=301
E-Value7E-191
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1128.69104404209
Replicate 2137.15230411991
Replicate 3139.2370324472
Condition 2: 8 Hour
Replicate 193.005134085335
Replicate 276.853787168445
Replicate 395.893382717226
Condition 3: 24 Hour
Replicate 1182.95507440565
Replicate 2209.55584917882
Replicate 3135.86317531138


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122816.p1 GENE.R_Transcript_122816~~R_Transcript_122816.p1 ORF type:5prime_partial len:357 (+),score=39.88,RmlD_sub_bind|PF04321.13|1.1e-13,Epimerase|PF01370.17|6.5e-12,GDP_Man_Dehyd|PF16363.1|1.7e-06 R_Transcript_122816:1-1071(+)
AGCACACGGTGGACAAAACCTCACCGTATTCCTTCCCCCACATGGGAAGAAAACCGCCCTACCAGTCACTGTCCTAACATTTTACAAGTACAAATACCACCACCACCAAACCCCTCCCTTCACTTCTTAAGATCCACAATCTCTCTCTCTCTCTCTCCCCTAACAAAAATGGGTTTCCCAGCCAACGGGTCCTCAGACAAGCCCCTGAAGTTCCTGATATACGGCCGCACGGGCTGGATCGGGGGCCTATTGGGCCAGCTCTGCCAGGCCCAAGGCATCCCCTACCAGTACGGTTCAGGCCGGCTCGAGAACCGGACCTCCCTAGAGGCTGACCTGGCGGCTGTGGACCCCACCCACGTCTTCAACGCCGCCGGTGTCACCGGCCGGCCCAACGTCGACTGGTGTGAGTCTCACAAGGTTGAGACCATCAGGACTAACGTTGTGGGCACCCTCACTCTTGCTGACGTGTGCCGTGACAAGGGACTTGTCTTGATTAATTATGCTACTGGTTGTATTTTTGAGTATGATAAGGATCATCCTGAGGGGTCTGGTGTTGGGTTTAAGGAAGAGGATTCTCCTAATTTTGTTGGATCTTTCTATTCCAAGACCAAGGCTATGGTAGAGGAGTTATTGAAGAACTATGAGAACGTATGCACATTGCGGGTGCGGATGCCAATCTCTTCTGATTTGGCCAATCCCCGCAACTTCATTACCAAGATCACACGGTACGAGAAGGTTGTCAACATTCCAAACTCAATGACAATCTTGGATGAACTCCTCCCAATCTCCATCGAGATGGCAAAGAGGAATCTTACAGGAATATACAACTTCACAAATCCTGGCGTTGTTAGCCACAACGAGATCTTAGAAATGTACCGCGAATACATTGACCCCAACTTCACATGGAAAAACTTCACCCTCGAGGAGCAAGCAAAGGTGATCGTTGCTCCAAGAAGTAACAACGAGCTTGACACCACCAAATTGAAGCAGGAATTCCCAGAGCTTTTGCCCATCAAGGAGTCTCTTATAAAGTATGCCTTTGGACCAAACAAGAAGACAGCTACTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122816.p1 GENE.R_Transcript_122816~~R_Transcript_122816.p1 ORF type:5prime_partial len:357 (+),score=39.88,RmlD_sub_bind|PF04321.13|1.1e-13,Epimerase|PF01370.17|6.5e-12,GDP_Man_Dehyd|PF16363.1|1.7e-06 R_Transcript_122816:1-1071(+)
STRWTKPHRIPSPTWEENRPTSHCPNILQVQIPPPPNPSLHFLRSTISLSLSPLTKMGFPANGSSDKPLKFLIYGRTGWIGGLLGQLCQAQGIPYQYGSGRLENRTSLEADLAAVDPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRDKGLVLINYATGCIFEYDKDHPEGSGVGFKEEDSPNFVGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLANPRNFITKITRYEKVVNIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYREYIDPNFTWKNFTLEEQAKVIVAPRSNNELDTTKLKQEFPELLPIKESLIKYAFGPNKKTATA*

Click here to download the sequence:
Link to NCBI Protein BLAST