Transcript Information: R_Transcript_122837.p1


Annotated TAIR IDAT3G04760.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1303884-1305692 | Reverse length=602
E-Value3.9E-250
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7043713800821
Replicate 21.2265879968284
Replicate 31.6530635378667
Condition 2: 8 Hour
Replicate 12.2298124436495
Replicate 22.2284040322831
Replicate 32.9628917679326
Condition 3: 24 Hour
Replicate 13.90519401296
Replicate 21.9705729592956
Replicate 33.8735972212207


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122837.p1 GENE.R_Transcript_122837~~R_Transcript_122837.p1 ORF type:complete len:582 (+),score=85.37,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|0.0086,PPR_2|PF13041.2|9.4e-20,PPR_2|PF13041.2|6.2e-15,PPR_2|PF13041.2|3.7e-15,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|7.8e-15,PPR_2|PF13041.2|2.1e-11,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|2.5e-14,PPR_2|PF13041.2|3.1e-13,PPR_2|PF13041.2|5e-14,PPR_2|PF13041.2|5.3e-15,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.0052,PPR_1|PF12854.3|2.7e-09,PPR_1|PF12854.3|6.1e-11,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|1e-07,PPR_1|PF12854.3|1.5e-05,PPR_1|PF12854.3|1.9e-11,PPR_1|PF12854.3|2.6e-08,PPR_1|PF12854.3|4.1e-09,PPR_1|PF12854.3|0.00069,PPR_1|PF12854.3|4.2e-11,PPR_1|PF12854.3|7e-09,PPR_1|PF12854.3|0.039,PPR|PF01535.16|21,PPR|PF01535.16|2.2,PPR|PF01535.16|5.2e-08,PPR|PF01535.16|3.1e-06,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00073,PPR|PF01535.16|9.7e-07,PPR|PF01535.16|8.9e-06,PPR|PF01535.16|8.3e-06,PPR|PF01535.16|0.0046,PPR|PF01535.16|6e-07,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|21,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|33,PPR_3|PF13812.2|0.0087,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|0.0007,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|0.00049,PPR_3|PF13812.2|0.0015,MRP-S27|PF10037.5|3.8e+02,MRP-S27|PF10037.5|1.5,MRP-S27|PF10037.5|0.52,MRP-S27|PF10037.5|0.32,TPR_14|PF13428.2|9.8e+03,TPR_14|PF13428.2|1.3e+03,TPR_14|PF13428.2|1.9e+03,TPR_14|PF13428.2|56,TPR_14|PF13428.2|1.4e+02,TPR_14|PF13428.2|6.6e+03,TPR_14|PF13428.2|2.3e+03,TPR_14|PF13428.2|28,TPR_14|PF13428.2|3.7e+02,TPR_14|PF13428.2|1.1e+04,ATP13|PF12921.3|7.8,ATP13|PF12921.3|56,ATP13|PF12921.3|7.4e+02,ATP13|PF12921.3|22,ATP13|PF12921.3|25,ATP13|PF12921.3|1.9e+03 R_Transcript_122837:195-1940(+)
ATGACAATATACTCTACTGAACTATTCCCTCATTGCCTTCCCTACATTTCTGAGCTCAGAGTCCCTCCTTCCTTGAATTCATACCATATCTGCCCCATAACCTGCAGAAAAACCATCTCACATGAGATCCACACGAGAACTTTTCCAAGACTCGAGGCTTATTCACCAGCGACTAAGTCGACCCTTTTGCAGCCAGTTGATTTCAAAGAGACCCAGTTGGTGAAACTCATCAAAAAGTCCTACAAAACTGGGAATTTGAATGAGGCCTTGTATTTCCTGCACTGTATGGCGAGCAGAGGATACAAACCTGATGTCGTCCTGTGTACGAAGCTCATCAAGGGATTCTTCAACATGAAAGATGTCAGTAAAGCAATTGAGGTGATGGAGATTTTGGAATCAAAAGGTGAGCCAGATGTGTTTGCATACAATGCCATGATCAATGGTCTTTGCAAGGTAAATAAAATTGAACATGCTAATGAACTGCTTAACAGGATGAAGGCTAGAGGGTTTTCCCCTGATATAGTTACCTATAATATCATGATTGGCAGTCTATGTAGCAGGGGAAAACTTAATTCGGCGTTGAGGTTGCTAGACAAGTTACTGAAAGATAACTGTCAGCCAACTGTTGTTACTTACACTATCTTAATCGAAGCTACTATCGTCGAAGGTGGGATCAAAGAAGCAACAAAGTTATTCAATGAGATGCTAGAAAGAGGGCTTGAGCCTGACATGTATGTCTACAACACTATGATTAGGGGGATGTGCAAAGAGGGGTTAGCAAATCAGGCACTCACCTTTGTTCGGAGCCTGCCCCTGAACGGCTGTCACCCTGACGTGATCTCGTACAACATCCTCTTACGAGCATTGCTAGACCAAGGGAAATGGGCGGAAGGGGAGCAGCTAGTAAGAGAGATGCTTTTGAGAGGCTGTGAGCCGAATCTTGTTACTCACAGCATATTGATCACTGCATTATGTCGTGAAGGAAAGGTCGAGGAGGCTCTGAATATGCTCAAAGTTATGCTAGAGCAGGGTCTGAAACCAGATAACTATAGCTATGATCCATTGATTTCGGCATTTTGTAAAGAGGGAAAGCTAGACTTAGCTATTGGGATCTTAGACCTTATGATATCAAATGGTTGCTTGCCTGATATTGTCAATTACAACACTGTTCTGGCTGCTCTCTGCAAGAATGGCAAGGCTGATCAAGCTCTGGAGATTTTTCATAAGCTCAGTGAGGTGGGTTGCAATCCTGATGTGAGCTCCTACAACTGCTTGATAAGTGCGTTGTGGAATAGTGGGGAGCGATCAAGGGCTATGATAATGGTCGAAGAAATGATTAACAAAGGGATTGATCCTGATGAGATCACTTACAATGCCCTTTTGTCCTGTTTGTGCAGAGATAGGATGGTTGATGAGGCCATGGAATTACTGCAGGCAATGGACAAGTTTAGTGTAAAACCAACTGTTATTAGCTACAATATGATAGTACTCGGTCTTTGCAAAGAACATCGGATGAGCGATGCTGTTGAATTGCTAGGGCGAATGGTTGAAAAGGGTTGTCAACCTAATGAAACTACTTACACTTTATTGATTGAAGGGATAGGATTTGCAGGCTGGCGTATTGAGGCTATGGAATTGGCAAATTCTCTAGCAGAAATGGGTGTTATTTCCCCGGATTCTTTAAGACGCTTGAGTAAGACCTTTCCTATTCATGTACAGAGAGAACTTGCAGCTTCTGGAATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122837.p1 GENE.R_Transcript_122837~~R_Transcript_122837.p1 ORF type:complete len:582 (+),score=85.37,PPR_2|PF13041.2|0.013,PPR_2|PF13041.2|0.0086,PPR_2|PF13041.2|9.4e-20,PPR_2|PF13041.2|6.2e-15,PPR_2|PF13041.2|3.7e-15,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|7.8e-15,PPR_2|PF13041.2|2.1e-11,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|2.5e-14,PPR_2|PF13041.2|3.1e-13,PPR_2|PF13041.2|5e-14,PPR_2|PF13041.2|5.3e-15,PPR_1|PF12854.3|2.2e+02,PPR_1|PF12854.3|0.0052,PPR_1|PF12854.3|2.7e-09,PPR_1|PF12854.3|6.1e-11,PPR_1|PF12854.3|2.4e-05,PPR_1|PF12854.3|1e-07,PPR_1|PF12854.3|1.5e-05,PPR_1|PF12854.3|1.9e-11,PPR_1|PF12854.3|2.6e-08,PPR_1|PF12854.3|4.1e-09,PPR_1|PF12854.3|0.00069,PPR_1|PF12854.3|4.2e-11,PPR_1|PF12854.3|7e-09,PPR_1|PF12854.3|0.039,PPR|PF01535.16|21,PPR|PF01535.16|2.2,PPR|PF01535.16|5.2e-08,PPR|PF01535.16|3.1e-06,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.00073,PPR|PF01535.16|9.7e-07,PPR|PF01535.16|8.9e-06,PPR|PF01535.16|8.3e-06,PPR|PF01535.16|0.0046,PPR|PF01535.16|6e-07,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|21,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|33,PPR_3|PF13812.2|0.0087,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|9.8,PPR_3|PF13812.2|0.0007,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|0.01,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.0012,PPR_3|PF13812.2|0.00049,PPR_3|PF13812.2|0.0015,MRP-S27|PF10037.5|3.8e+02,MRP-S27|PF10037.5|1.5,MRP-S27|PF10037.5|0.52,MRP-S27|PF10037.5|0.32,TPR_14|PF13428.2|9.8e+03,TPR_14|PF13428.2|1.3e+03,TPR_14|PF13428.2|1.9e+03,TPR_14|PF13428.2|56,TPR_14|PF13428.2|1.4e+02,TPR_14|PF13428.2|6.6e+03,TPR_14|PF13428.2|2.3e+03,TPR_14|PF13428.2|28,TPR_14|PF13428.2|3.7e+02,TPR_14|PF13428.2|1.1e+04,ATP13|PF12921.3|7.8,ATP13|PF12921.3|56,ATP13|PF12921.3|7.4e+02,ATP13|PF12921.3|22,ATP13|PF12921.3|25,ATP13|PF12921.3|1.9e+03 R_Transcript_122837:195-1940(+)
MTIYSTELFPHCLPYISELRVPPSLNSYHICPITCRKTISHEIHTRTFPRLEAYSPATKSTLLQPVDFKETQLVKLIKKSYKTGNLNEALYFLHCMASRGYKPDVVLCTKLIKGFFNMKDVSKAIEVMEILESKGEPDVFAYNAMINGLCKVNKIEHANELLNRMKARGFSPDIVTYNIMIGSLCSRGKLNSALRLLDKLLKDNCQPTVVTYTILIEATIVEGGIKEATKLFNEMLERGLEPDMYVYNTMIRGMCKEGLANQALTFVRSLPLNGCHPDVISYNILLRALLDQGKWAEGEQLVREMLLRGCEPNLVTHSILITALCREGKVEEALNMLKVMLEQGLKPDNYSYDPLISAFCKEGKLDLAIGILDLMISNGCLPDIVNYNTVLAALCKNGKADQALEIFHKLSEVGCNPDVSSYNCLISALWNSGERSRAMIMVEEMINKGIDPDEITYNALLSCLCRDRMVDEAMELLQAMDKFSVKPTVISYNMIVLGLCKEHRMSDAVELLGRMVEKGCQPNETTYTLLIEGIGFAGWRIEAMELANSLAEMGVISPDSLRRLSKTFPIHVQRELAASGI*

Click here to download the sequence:
Link to NCBI Protein BLAST