Transcript Information: R_Transcript_122969.p1


Annotated TAIR IDAT3G03790.3
Annotated Gene Nameankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:963195-968011 | Forward length=1099
E-Value1.3E-198
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7690250364744
Replicate 21.300080521133
Replicate 31.4892925372112
Condition 2: 8 Hour
Replicate 12.7290747309623
Replicate 24.0152667083243
Replicate 34.551951889323
Condition 3: 24 Hour
Replicate 13.5538401281276
Replicate 22.1167585932133
Replicate 33.2526619968145


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_122969.p1 GENE.R_Transcript_122969~~R_Transcript_122969.p1 ORF type:5prime_partial len:323 (+),score=86.43,RCC1|PF00415.14|4.9e-08,RCC1|PF00415.14|2.1e-08,RCC1|PF00415.14|9.9e-13,RCC1|PF00415.14|6.1e-08,RCC1_2|PF13540.2|1.1e+02,RCC1_2|PF13540.2|0.0018,RCC1_2|PF13540.2|9.1e-06,RCC1_2|PF13540.2|3.4e-05,Ank_5|PF13857.2|6.3e-09,Ank_5|PF13857.2|0.0021,Ank_4|PF13637.2|1.3e-05,Ank_4|PF13637.2|4.5e-08,Ank_2|PF12796.3|1.3e-11,Ank|PF00023.26|3e-05,Ank|PF00023.26|0.33,Ank_3|PF13606.2|0.00057,Ank_3|PF13606.2|0.17 R_Transcript_122969:3-971(+)
TGGCTTCTTGTGAGAGAAGGTTCTTTGGCTGATGTTGAATTAGCTTTGGCACAATTGAAGAAGAATGGTGGTAATATCAACTCAAGGAATGCATTTGGCCTTACTCCACTGCATATTGCTACTTGGCGAAATCACATCCCTATTGTTAGAAGGCTCCTTGATGCTGGTGCAGACCCCGATGCTAGGGATGGAGAATCTGGTTGGAGTAGTCTTCACAGGGCTTTGCATTTTGGTCACCTTGCTGTGGCAAGTGTCCTCCTCCAGTCTGGGGCTTCTCCCACAATTGAGGACTCCAAATTACGAACTCCTGTTGATCTCCTTTCTGGACCTGTATCACAGATACTTGGTGATCAACATGCTTCAGTTACAACTGAGATCTTTAGCTGGGGAAGTGGTACTAATTATCAACTTGGAACGGGAAATGCTCACATTCAGAAGTTACCTTGCAAACTTGACGAACTTCATGGTTCGACCATCAAACTGATTTCTGCTTCAAAATTTCATAGTGTGGCTGTCACTGGTCGTGGAGAACTGTACACTTGGGGATTTGGGAGGGGTGGTCGCCTTGGACATCCTGAATTTGACATTCACAGTGGTCAGGCTGCAGTTATTACACCAAGACAGGTGATTTCCGGTCTTGGTTCTCGTCGAGTCAAGGCAGTTGCTGCAGCTAAACATCATACTGTCATTGCAACTGAAACTGGGGAAGTTTTCACTTGGGGTTCTAATAGAGAGGGTCAACTTGGCTATGCTTCTGTGGACACCCAACCAACCCCACGTAGGGTTAGTTCTTTGAAGGGAAGAGTAGTAGCAGTTGCTGCGGCAAATAAACACACTGCTGCAGTTTCTGAGATGGGTGAAGTATTCACGTGGGGCTGCAACAAGGAAGGTCAACTTGGCTATGGCTCGTCAAACTCGGGTTCTAATAATACTCCTGGATTGGTTGAATATTTGAAAGGCAAGGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_122969.p1 GENE.R_Transcript_122969~~R_Transcript_122969.p1 ORF type:5prime_partial len:323 (+),score=86.43,RCC1|PF00415.14|4.9e-08,RCC1|PF00415.14|2.1e-08,RCC1|PF00415.14|9.9e-13,RCC1|PF00415.14|6.1e-08,RCC1_2|PF13540.2|1.1e+02,RCC1_2|PF13540.2|0.0018,RCC1_2|PF13540.2|9.1e-06,RCC1_2|PF13540.2|3.4e-05,Ank_5|PF13857.2|6.3e-09,Ank_5|PF13857.2|0.0021,Ank_4|PF13637.2|1.3e-05,Ank_4|PF13637.2|4.5e-08,Ank_2|PF12796.3|1.3e-11,Ank|PF00023.26|3e-05,Ank|PF00023.26|0.33,Ank_3|PF13606.2|0.00057,Ank_3|PF13606.2|0.17 R_Transcript_122969:3-971(+)
WLLVREGSLADVELALAQLKKNGGNINSRNAFGLTPLHIATWRNHIPIVRRLLDAGADPDARDGESGWSSLHRALHFGHLAVASVLLQSGASPTIEDSKLRTPVDLLSGPVSQILGDQHASVTTEIFSWGSGTNYQLGTGNAHIQKLPCKLDELHGSTIKLISASKFHSVAVTGRGELYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATETGEVFTWGSNREGQLGYASVDTQPTPRRVSSLKGRVVAVAAANKHTAAVSEMGEVFTWGCNKEGQLGYGSSNSGSNNTPGLVEYLKGKV*

Click here to download the sequence:
Link to NCBI Protein BLAST