Transcript Information: R_Transcript_123044.p1


Annotated TAIR IDAT5G59900.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24123983-24126706 | Reverse length=907
E-Value1.6E-304
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4703255427439
Replicate 20.94720152253976
Replicate 31.4270577664628
Condition 2: 8 Hour
Replicate 11.8673430840541
Replicate 22.1856501047775
Replicate 32.7295655068251
Condition 3: 24 Hour
Replicate 12.3179740917338
Replicate 21.7767394380164
Replicate 33.0327754077441


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123044.p1 GENE.R_Transcript_123044~~R_Transcript_123044.p1 ORF type:complete len:931 (+),score=147.04,PPR_2|PF13041.2|0.0091,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|0.0025,PPR_2|PF13041.2|2.8e-12,PPR_2|PF13041.2|0.0034,PPR_2|PF13041.2|0.028,PPR_2|PF13041.2|2.5e-18,PPR_2|PF13041.2|4e-09,PPR_2|PF13041.2|3e-14,PPR_2|PF13041.2|5.9e-19,PPR_2|PF13041.2|6.7e-17,PPR_2|PF13041.2|1.2e-16,PPR_2|PF13041.2|8.5e-05,PPR_2|PF13041.2|7.9e-11,PPR_2|PF13041.2|9.1e-09,PPR_2|PF13041.2|8.3e-18,PPR_2|PF13041.2|3.8e-13,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|3.7e-16,PPR_2|PF13041.2|5.1e-13,PPR_2|PF13041.2|2.1e-06,PPR_1|PF12854.3|4.9e-06,PPR_1|PF12854.3|6.3e-06,PPR_1|PF12854.3|0.00095,PPR_1|PF12854.3|22,PPR_1|PF12854.3|2.6e-10,PPR_1|PF12854.3|6.1e-09,PPR_1|PF12854.3|2.9e-07,PPR_1|PF12854.3|9.3e-12,PPR_1|PF12854.3|1.8e-12,PPR_1|PF12854.3|1.9e-10,PPR_1|PF12854.3|2.1e-09,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|16,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|5.1e-11,PPR_1|PF12854.3|73,PPR_1|PF12854.3|3.2e-11,PPR_1|PF12854.3|2.7e-08,PPR_1|PF12854.3|0.00019,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|9.1,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|3.4,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.74,PPR|PF01535.16|3,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|9.2e-06,PPR|PF01535.16|4.7e-06,PPR|PF01535.16|5.8e-09,PPR|PF01535.16|6.3e-07,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|0.0017,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|8.5,PPR|PF01535.16|8.7e-08,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|8.5,PPR|PF01535.16|6.6e-09,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|0.00037,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|6.8,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|8.5e-05,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|0.0054,PPR_3|PF13812.2|0.81,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|9.2e-05,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|5.4e-06,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|0.96,MRP-S27|PF10037.5|29,MRP-S27|PF10037.5|0.063,MRP-S27|PF10037.5|0.7,MRP-S27|PF10037.5|3.8e+02,MRP-S27|PF10037.5|1.1e+02,MRP-S27|PF10037.5|0.0024,MRP-S27|PF10037.5|42,ATP13|PF12921.3|61,ATP13|PF12921.3|8e+02,ATP13|PF12921.3|5.2,ATP13|PF12921.3|85,ATP13|PF12921.3|1e+02,ATP13|PF12921.3|90,ATP13|PF12921.3|4.1e+02,ATP13|PF12921.3|47,ATP13|PF12921.3|3.4e+02 R_Transcript_123044:480-3272(+)
ATGAGATTTAGAATGGTGGCTGGACGTGTACTTGTGCCTCTACCGTTACCTCTGTGGCCCCTCTCAAAAGTGAAATGCTGTTGGAAACTTTTAAGTACACCTTCAGCTTGCCATAACGGGGAGGAGCAAGAAGAAGAGAGAGTGGTGAGAGAGGTAAGTTCTATCCTCCGTGACCAGCCCCAGAGCTGCTGGAGAGATGCCTTTGCCTTTTCCCTTTCTCCCTCGGGTCCGAATTACCTTCAGCCCCGCCTTGTGGAGAAGGTGCTCCTCCAGACCCTTGATACTGATGATCCCAAGTTAGCTCTCCGCTTCTTCAACTTCTTAGGCCTCCACTACAACTTCCCCCACTCCACAACATCATTTTGCATCCTTGTCTATGCTCTCCTTCATTCTCGTCTCTTTTGGCCTGCCACTTCCCTCTTTCAAACCCTTCTTCTCCGCAACTGCCCTGCTTCCCTCCTTTTCCATGAGCTAATAGCTACCTATAAGTTGCTTCACCAGCATAATTACCGCTTGTTCTCTTTACCCTCCCCCTCCCCTCTGGCATTTGAGTTTCTAATCCAGAGTTATGTGCATAGTAGGAGGCCTCTCGATGCCGTTATCATCCTTAACCTCATGTTGTCTAATTCCCTCGTCCCTGAGGTTAGGACTCTCAATGCTTTGTTCCATGCATTGATTTCTATTCGACGTTTTCGTTTAGTTCTTGAGTTGTTTGACCCTCTTGTCCATTTTCATGGCATTAAACCTGATGTTTACATGTATACTGCTGTTGTTCGCTGCCTCTGTGAGCTCAGAGATTTAGACAGGGCCTGCCAGGTTGTCCGCTGGATGGAGTCCTCTGCTGTTGCGTCTGACTCTGTCTTGAAATTGAATGTCATCCCCTATAATGTTCTGATTCGTGGCTTGTGTAAGAATCAAAGGGTTTTGGAGGCTCTGGAGCTTAAAAACTCCCTGCCTTTAAAGGGTTTGAGGCCGGATGCTATTACTTACTGCACCCTGCTTCTGGGGCTATGCCAAGCTCGAGACTACCCTCTAGCTTTGGCTATCACTACAGAGATGACTAACATTGGTTTGATCCCTAGTGAGGCTGCTGTATCTGCTCTTGTTGATGGCTTTAGAAGAATGGGAAACATCGAGCATGCTTTCCATGTGGTGAATGACTTGGCCAAGTACGGAGTGGTCCCTAATGTGGTCATTTATACTGCTCTAATCAACTCTCTTTGCAAAGATGGAAAACTGGAACAAGCTCAGTCACTCTTTATGGCTATGGAACAACGAGGACTCTTCCCTAACGAAGTGACGTTTCTGGTCATGATTGACTCCTATTGCAAGCATGGGAGGTTGGATAATGCAATTCACACCCTTGCTAAAATGGTGGACTCCGGTGTCAAGATGACAGACTATCCTTATAATTCTTTGATTTATGGCCATTGTAAGTCTGGAAAGTTGAATACCGCCGAGTGCCTTTTCAGAGAAATGGCCAGCAAGGATCTGACACCCACTGTGGTAACTTATACTTCGTTAATTAGTGGATACTGCAGGGGAGGAGATCTCAACAATGCTTTTAATCTCTATCATGAGATGACTGGAAAAGGCATCATGCCTAACACTTATACTTATTCTGCACTTATCTTTGGTCTTTGTCGTGCAAATAGGATGGATGCTGCACACAACTTATTCCGTGAAATGATTAGCAGAAATGTCAACCCAAATGAGGTGACCTACAATGTTTTGATTGATGGCTATTGCAGGGAAGATAATATTTTGAGGGCTTCCCATTTGCTGCATGAAATGTTGGACAAGGGTCTTGTTCCAGATACATACACGTACAGGTCCTTCATATCTGGACTCTGTTCTGCTGGGAGGGTGTCTGAAGCCAAAGATCTGGTGGATAATCTTCACAAAGAGAAACACAAGTTGAATGAGACTTGTTACAGTGCTCTTTTAAGCGGTTATTGCAAGGAGGGGAAATTAGAGGATGCCTTCCGTGTTTGTGGCGAAATGATGGGGAGACAAATCAAGATGGATACTGTCTGTTATGCTATACTTATTGATGCTTCACTGAAGCATAAAGATAAGGAAAGGCTATTGCAGATCTTACAAGAGATGAATCATAAAGGTTTGAAGCCTGACAATGTGATGTATACAAGTATGATTGATGCTTACACTAAAGCAGGTAATCTTAATAGGGCATTTGAACTTTGGAATTTGATGAACAGTGAAGGATGTGAGCCTAATGTTGTTACTTACACTACCCTCATCAGCGGCTTATGCAAACTGGGATATGCAAGCAAAGCACATCTTTTGTATAAGGAAATGCTGGAAAGTGATGCACATCCGAACCAGGTTACATATGGGTGCTTCCTTGGCTACTTTACTAGTGTAGGAAATATGGAGATTGCCATACAACTTCACAAGTTGATGCTTAAGGGGTCTCTGGCCAACACTGTCACATTTAATATTCTGATACATGGTTTCTGCAATCTTGGTAGGGTTGAAGAGGCCTCTGAACTTATTGGAGAAATGATGGAAAATGGTATAAAACCTGACTGCATAAGCTATTCTACTATAATGAATGAGTATTGTAGAGGGGGTAAAATGCAGGAAGCTTTTAAGACATGGGACTCTATGTTGAGTAAGGGCATATGTCCTGATGCAGTGGCCTACAACATGCTGATCTCTGGGTGTACTTTGTCTGGAGACCACACCAAGGCTTCTATGTTGAGGGATGACATGACAAGAAGGGGTGTGAAAACAGATACGAAGTTTTACTATCCTTTCTTTAATACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123044.p1 GENE.R_Transcript_123044~~R_Transcript_123044.p1 ORF type:complete len:931 (+),score=147.04,PPR_2|PF13041.2|0.0091,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|0.0025,PPR_2|PF13041.2|2.8e-12,PPR_2|PF13041.2|0.0034,PPR_2|PF13041.2|0.028,PPR_2|PF13041.2|2.5e-18,PPR_2|PF13041.2|4e-09,PPR_2|PF13041.2|3e-14,PPR_2|PF13041.2|5.9e-19,PPR_2|PF13041.2|6.7e-17,PPR_2|PF13041.2|1.2e-16,PPR_2|PF13041.2|8.5e-05,PPR_2|PF13041.2|7.9e-11,PPR_2|PF13041.2|9.1e-09,PPR_2|PF13041.2|8.3e-18,PPR_2|PF13041.2|3.8e-13,PPR_2|PF13041.2|1.1,PPR_2|PF13041.2|3.7e-16,PPR_2|PF13041.2|5.1e-13,PPR_2|PF13041.2|2.1e-06,PPR_1|PF12854.3|4.9e-06,PPR_1|PF12854.3|6.3e-06,PPR_1|PF12854.3|0.00095,PPR_1|PF12854.3|22,PPR_1|PF12854.3|2.6e-10,PPR_1|PF12854.3|6.1e-09,PPR_1|PF12854.3|2.9e-07,PPR_1|PF12854.3|9.3e-12,PPR_1|PF12854.3|1.8e-12,PPR_1|PF12854.3|1.9e-10,PPR_1|PF12854.3|2.1e-09,PPR_1|PF12854.3|1.9e-08,PPR_1|PF12854.3|16,PPR_1|PF12854.3|1.6e-08,PPR_1|PF12854.3|5.1e-11,PPR_1|PF12854.3|73,PPR_1|PF12854.3|3.2e-11,PPR_1|PF12854.3|2.7e-08,PPR_1|PF12854.3|0.00019,PPR|PF01535.16|6.3e+03,PPR|PF01535.16|9.1,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|3.4,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.74,PPR|PF01535.16|3,PPR|PF01535.16|5.2e-07,PPR|PF01535.16|9.2e-06,PPR|PF01535.16|4.7e-06,PPR|PF01535.16|5.8e-09,PPR|PF01535.16|6.3e-07,PPR|PF01535.16|2.7e-07,PPR|PF01535.16|0.0017,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|8.5,PPR|PF01535.16|8.7e-08,PPR|PF01535.16|1.8e-07,PPR|PF01535.16|8.5,PPR|PF01535.16|6.6e-09,PPR|PF01535.16|3.4e-06,PPR|PF01535.16|0.00037,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|0.0055,PPR_3|PF13812.2|15,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|6.8,PPR_3|PF13812.2|0.0018,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|8.5e-05,PPR_3|PF13812.2|1.7e-05,PPR_3|PF13812.2|0.0054,PPR_3|PF13812.2|0.81,PPR_3|PF13812.2|0.059,PPR_3|PF13812.2|0.021,PPR_3|PF13812.2|9.2e-05,PPR_3|PF13812.2|0.02,PPR_3|PF13812.2|2.3e+03,PPR_3|PF13812.2|5.4e-06,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|0.96,MRP-S27|PF10037.5|29,MRP-S27|PF10037.5|0.063,MRP-S27|PF10037.5|0.7,MRP-S27|PF10037.5|3.8e+02,MRP-S27|PF10037.5|1.1e+02,MRP-S27|PF10037.5|0.0024,MRP-S27|PF10037.5|42,ATP13|PF12921.3|61,ATP13|PF12921.3|8e+02,ATP13|PF12921.3|5.2,ATP13|PF12921.3|85,ATP13|PF12921.3|1e+02,ATP13|PF12921.3|90,ATP13|PF12921.3|4.1e+02,ATP13|PF12921.3|47,ATP13|PF12921.3|3.4e+02 R_Transcript_123044:480-3272(+)
MRFRMVAGRVLVPLPLPLWPLSKVKCCWKLLSTPSACHNGEEQEEERVVREVSSILRDQPQSCWRDAFAFSLSPSGPNYLQPRLVEKVLLQTLDTDDPKLALRFFNFLGLHYNFPHSTTSFCILVYALLHSRLFWPATSLFQTLLLRNCPASLLFHELIATYKLLHQHNYRLFSLPSPSPLAFEFLIQSYVHSRRPLDAVIILNLMLSNSLVPEVRTLNALFHALISIRRFRLVLELFDPLVHFHGIKPDVYMYTAVVRCLCELRDLDRACQVVRWMESSAVASDSVLKLNVIPYNVLIRGLCKNQRVLEALELKNSLPLKGLRPDAITYCTLLLGLCQARDYPLALAITTEMTNIGLIPSEAAVSALVDGFRRMGNIEHAFHVVNDLAKYGVVPNVVIYTALINSLCKDGKLEQAQSLFMAMEQRGLFPNEVTFLVMIDSYCKHGRLDNAIHTLAKMVDSGVKMTDYPYNSLIYGHCKSGKLNTAECLFREMASKDLTPTVVTYTSLISGYCRGGDLNNAFNLYHEMTGKGIMPNTYTYSALIFGLCRANRMDAAHNLFREMISRNVNPNEVTYNVLIDGYCREDNILRASHLLHEMLDKGLVPDTYTYRSFISGLCSAGRVSEAKDLVDNLHKEKHKLNETCYSALLSGYCKEGKLEDAFRVCGEMMGRQIKMDTVCYAILIDASLKHKDKERLLQILQEMNHKGLKPDNVMYTSMIDAYTKAGNLNRAFELWNLMNSEGCEPNVVTYTTLISGLCKLGYASKAHLLYKEMLESDAHPNQVTYGCFLGYFTSVGNMEIAIQLHKLMLKGSLANTVTFNILIHGFCNLGRVEEASELIGEMMENGIKPDCISYSTIMNEYCRGGKMQEAFKTWDSMLSKGICPDAVAYNMLISGCTLSGDHTKASMLRDDMTRRGVKTDTKFYYPFFNT*

Click here to download the sequence:
Link to NCBI Protein BLAST