Transcript Information: R_Transcript_123163.p1


Annotated TAIR IDAT3G15130.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5097153-5099222 | Reverse length=689
E-Value2.9E-291
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65658132930643
Replicate 20.4833680671378
Replicate 30.7251053627559
Condition 2: 8 Hour
Replicate 10.84555504853796
Replicate 20.3860871684809
Replicate 30.47011365635535
Condition 3: 24 Hour
Replicate 10.56155787463449
Replicate 20.63468370908136
Replicate 30.91329990779859


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123163.p1 GENE.R_Transcript_123163~~R_Transcript_123163.p1 ORF type:complete len:695 (+),score=149.64,PPR_2|PF13041.2|0.00085,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|3.3e+02,PPR_2|PF13041.2|4.6e-11,PPR_2|PF13041.2|13,PPR_2|PF13041.2|5.8e-06,PPR_2|PF13041.2|0.093,PPR_2|PF13041.2|1.3e-10,PPR_2|PF13041.2|5.2,PPR_2|PF13041.2|7.5e+03,PPR|PF01535.16|0.00089,PPR|PF01535.16|0.0076,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|2,PPR|PF01535.16|4.2e-05,PPR|PF01535.16|3.9e+02,PPR|PF01535.16|0.29,PPR|PF01535.16|0.001,PPR|PF01535.16|0.0013,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|0.0028,PPR|PF01535.16|0.021,PPR|PF01535.16|91,PPR|PF01535.16|7.7e+02,PPR|PF01535.16|1.1e+03,PPR_1|PF12854.3|0.00071,PPR_1|PF12854.3|5.3,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|8.2e+02,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.0055,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|0.0029,PPR_1|PF12854.3|37,PPR_1|PF12854.3|0.11,DYW_deaminase|PF14432.2|4.6e-28,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|8,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|9.8e+03,PPR_3|PF13812.2|1.9e+03 R_Transcript_123163:209-2293(+)
ATGAGCCAGTCGTTTACAAGTTTGTTAAGGAATGAACAGTTGAGGATAGCCAAATATTTGAGGTATTGTTCCAAGAATTTGTTGCTAGACAAAGGGAAACAGGCTCATGTAGCAGTGCTTAAGATGGGTTTTTGTTCTGACGTGATAATAAACAATGATCTTATTGATATGTATGGTAAGTGTAAGAGGATAGACAGTGCCTATAAGGTGTTTGATAAAATGTCCCAAAGAAACGTGGTGTCTTGGACTGGTCTTATTTGTGGGTTTTTACATCAGGGGGATGCTGAAGGAGCATTATCTGTTTTGTATAGGATGAGTTTTTCTGATGTTCAACCCAATGAGTATACTTTTTCTGCTTGTTTCAAAGCTTGTGGGATTGTGGGTATCCCTGAAAAGGGAATGCAAGTACATGGCTTCTGTGTGAAAGTTGGGTATGAGTGGTTCCCTGTTGTGGCGAATTCTGTTGTTGACATGTATGCAAAGTGTGGGTGTATTGGAAGAGCAGCTCAAGCCTTTTATTATATGCCTGTCAAGAATCTTATAGCATGGAATACCATTATAGCCGGGTACAGTTCTGAAGGAAACGGCGTGGAAGCAATTGAAAGTTTCCTGAAAATGGTAAAGGAAGGTGAACGTCCGGATGAATACACATTTACGAGTGTGCTGAAAGCTTGTAGTATTGCTGGGGTTGTTCACTGGGGCACCCAGATTCATGCTGCCCTGATAACTAGAGGATTCCCAATTTTTGATCTGACAGCTATTGTTGGTGGACTTATAGACATGTATGTAAAGTGCAGTTGCCTACTTGAGGCCAGGAAGCTCTTTGATCACATTGAAGATAGAAATGTGGTCTCTTGGGCTTCTCTAGTTTTGGGTTATGCACAAGAAGGTTACCTTTCAGAAGCTATGGATATCTTTAGACAGGTTAGGGAGTGTGACATTCAAGTAGATGCGTTCACTCTGTCAGGATTAATTGGTATCTTTGCTGACTATGCTTTTGTGGAGCAAGGGAAGCAGATGCATTCTTATGTCATTAAGGTCCCTTCTGGTCTAGAACTAGAAGTTGCCAATTCAATTACTGATTTGTATCTTAAATGTGGATTGATGGATGAAGCAGAGAGGTTTTTCAATGAAATGCCTCTGAAAAATAGAGTTTCCTACACAGTTATGATTACTGGCTATGGGAAGTATGGTCTTGGGAAAGAAGCCATAGTCCTTTTCAAGAAAATGCTTTCTGAAAACATAAGGCCTGACAGTGTAACTTACTTGGCTATTCTTTCAGCTTGTAGCCATTCAGGACTGATAGAAGAATGTGAAGAGTGCTTCTCAAAATTATGCAGCGATCGCTGGACCCTGCCAAGAGTGGAGCACTATTCTTGCATGGTTGATCTACTAGGTCGAGCTGGTCGCTTAAAAGATGCCAAAAATCTCATACAGAGCATGCCTGTGAAAGCAAACATAGGAGTATGGCAGACATTGTTGAGTGCTTGTAGGGTTCATGGAGACCTGGAACTTGGGAAAGAAATTGGAAAGATCATCTTAGAGTTGGATGGAGATAATCCGGTTAATTATGTTTTGATGTCAAACATTTATGCTAATGGCGGATACTGGAAGGAATCTCAAGTGCTGAGAGAAGTAGTGAAAAAGAAAGGTTTGAAGAAAGAGGCTGGCCAGAGTTGGGTTGACATTGACAAAGAGATTCATTTCTTTTATGGAGGAGATGATTCTCATCCACTAATCGAAAAAATTCACCAAGTATTGAAAGAAATGGAAAGGAGGTTGAAAGAAGAGTTGGGCTACACTCATGAAGCAAGGTTTGCATTACCTGATGTGGAAGAAGAGTCAAAGGAGGAGAACTTGAGAGTTCACAGTGAGAAGTTGGCTATTGGCCTAGCATTGCTCTGTGGTGGATTGGAAAAGGATGGGAAGGTTATTAGGGTTTTCAAAAACTTGAGGGTTTGTGGGGATTGCCATGCATTCATCAAGGGTTTGTCGAAGGTTCTTAATAAGGTGTTTTTGGTCCGAGATGCCAATAGATTTCACAAATTCCAGGATGGTGTTTGTTCTTGTGGAGAATATTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123163.p1 GENE.R_Transcript_123163~~R_Transcript_123163.p1 ORF type:complete len:695 (+),score=149.64,PPR_2|PF13041.2|0.00085,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|3.3e+02,PPR_2|PF13041.2|4.6e-11,PPR_2|PF13041.2|13,PPR_2|PF13041.2|5.8e-06,PPR_2|PF13041.2|0.093,PPR_2|PF13041.2|1.3e-10,PPR_2|PF13041.2|5.2,PPR_2|PF13041.2|7.5e+03,PPR|PF01535.16|0.00089,PPR|PF01535.16|0.0076,PPR|PF01535.16|2.4e+03,PPR|PF01535.16|2,PPR|PF01535.16|4.2e-05,PPR|PF01535.16|3.9e+02,PPR|PF01535.16|0.29,PPR|PF01535.16|0.001,PPR|PF01535.16|0.0013,PPR|PF01535.16|2.6e-07,PPR|PF01535.16|0.0028,PPR|PF01535.16|0.021,PPR|PF01535.16|91,PPR|PF01535.16|7.7e+02,PPR|PF01535.16|1.1e+03,PPR_1|PF12854.3|0.00071,PPR_1|PF12854.3|5.3,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|8.2e+02,PPR_1|PF12854.3|0.55,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.0055,PPR_1|PF12854.3|0.04,PPR_1|PF12854.3|0.0029,PPR_1|PF12854.3|37,PPR_1|PF12854.3|0.11,DYW_deaminase|PF14432.2|4.6e-28,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|1.1,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1e+03,PPR_3|PF13812.2|1.5e+02,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|3.7e+02,PPR_3|PF13812.2|8,PPR_3|PF13812.2|29,PPR_3|PF13812.2|0.017,PPR_3|PF13812.2|4.8,PPR_3|PF13812.2|1.2,PPR_3|PF13812.2|9.8e+03,PPR_3|PF13812.2|1.9e+03 R_Transcript_123163:209-2293(+)
MSQSFTSLLRNEQLRIAKYLRYCSKNLLLDKGKQAHVAVLKMGFCSDVIINNDLIDMYGKCKRIDSAYKVFDKMSQRNVVSWTGLICGFLHQGDAEGALSVLYRMSFSDVQPNEYTFSACFKACGIVGIPEKGMQVHGFCVKVGYEWFPVVANSVVDMYAKCGCIGRAAQAFYYMPVKNLIAWNTIIAGYSSEGNGVEAIESFLKMVKEGERPDEYTFTSVLKACSIAGVVHWGTQIHAALITRGFPIFDLTAIVGGLIDMYVKCSCLLEARKLFDHIEDRNVVSWASLVLGYAQEGYLSEAMDIFRQVRECDIQVDAFTLSGLIGIFADYAFVEQGKQMHSYVIKVPSGLELEVANSITDLYLKCGLMDEAERFFNEMPLKNRVSYTVMITGYGKYGLGKEAIVLFKKMLSENIRPDSVTYLAILSACSHSGLIEECEECFSKLCSDRWTLPRVEHYSCMVDLLGRAGRLKDAKNLIQSMPVKANIGVWQTLLSACRVHGDLELGKEIGKIILELDGDNPVNYVLMSNIYANGGYWKESQVLREVVKKKGLKKEAGQSWVDIDKEIHFFYGGDDSHPLIEKIHQVLKEMERRLKEELGYTHEARFALPDVEEESKEENLRVHSEKLAIGLALLCGGLEKDGKVIRVFKNLRVCGDCHAFIKGLSKVLNKVFLVRDANRFHKFQDGVCSCGEYW*

Click here to download the sequence:
Link to NCBI Protein BLAST