Transcript Information: R_Transcript_123168.p1


Annotated TAIR IDAT2G33680.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:14249608-14251791 | Forward length=727
E-Value4.4E-277
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0737035855717
Replicate 20.48198107124931
Replicate 30.85448375538015
Condition 2: 8 Hour
Replicate 10.91338951022722
Replicate 20.54538736198014
Replicate 31.0416993182431
Condition 3: 24 Hour
Replicate 11.0210789441303
Replicate 21.2657250439356
Replicate 31.6015393673339


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123168.p1 GENE.R_Transcript_123168~~R_Transcript_123168.p1 ORF type:complete len:697 (+),score=142.14,PPR|PF01535.16|0.92,PPR|PF01535.16|0.008,PPR|PF01535.16|0.00049,PPR|PF01535.16|0.0022,PPR|PF01535.16|1.9,PPR|PF01535.16|6.5e-06,PPR|PF01535.16|2.5e+03,PPR|PF01535.16|8,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.085,PPR|PF01535.16|4.4e-09,PPR|PF01535.16|0.1,PPR|PF01535.16|0.25,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|9.3,PPR_2|PF13041.2|38,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|0.0072,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|14,PPR_2|PF13041.2|3.9e-09,PPR_2|PF13041.2|77,PPR_2|PF13041.2|4.4e-12,PPR_2|PF13041.2|3e+02,PPR_2|PF13041.2|4.7e-14,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|88,PPR_2|PF13041.2|44,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|0.00058,PPR_3|PF13812.2|4.2,PPR_3|PF13812.2|64,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|4.1e-05,PPR_3|PF13812.2|52,PPR_3|PF13812.2|0.0003,PPR_3|PF13812.2|8.2e+03,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|9.6,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|3.6e+02,PPR_1|PF12854.3|3.9e+02,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|0.02,PPR_1|PF12854.3|3.9e+03,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|6.7e+02,PPR_1|PF12854.3|1.6e-06,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|3e+02,TPR_19|PF14559.2|13,TPR_19|PF14559.2|1.9e+03,TPR_19|PF14559.2|2.4e+03,TPR_19|PF14559.2|4.1e+03,TPR_19|PF14559.2|1e+03,TPR_19|PF14559.2|2.5e+02,TPR_19|PF14559.2|19,TPR_19|PF14559.2|0.15,TPR_14|PF13428.2|3.9e+03,TPR_14|PF13428.2|3e+02,TPR_14|PF13428.2|1.7e+02,TPR_14|PF13428.2|37,TPR_14|PF13428.2|22,TPR_14|PF13428.2|31 R_Transcript_123168:271-2361(+)
ATGAGTGCAGCCCATCGAGCACTATTTAAGGAACTCCTGAAGCTCACTCAAGAGCAAAACCTCCAAACAGGAAAAGCCCTTCACGCCAAAATCATCAAAACAGATTCTTTCTCCAATGTATACTTAGCCAACAGCATAGTCAACTTATATGCAAAATGTGGGCAACTAACCAAAGCTAAGCTTGCTTTTGACCGAATTACTCACAAAGATGACGTGTCATGGAGCTCCATTCTCAATGCATATTGTGGGTCCAAATCCTTTCACCTTGTTATGTACCTTTTTAAGCACATGAGAGCTGAGAATTGTTTACCCAATGCTCATTGTTTTGCTGGGATTTTCACTTCTGTGTCGAATTTAGGCGATGATTTGGTTGGTAAACAGGCTCATTCATTGGCAATTAAGACTGATAGATGTGGGGAAGTGGTGGTTGGTAGCTCTATTCTTAACATGTATTGCAAAACGGGTCTGTTATGCGATGCACGCCAACTGTTTGATAAAATGCCTGAGAGAAATTCGGTGTCATGGGCGACGATGATTTCTGGGTATGGATCATGTGGAATCGCTGAAGAAGCCGTGGGGTTGTTTCAGTTGATTATGCGGGGAGAAGAGGAAAGAGGGAACCAGTTTTTCTTGACTAGTGTGCTTAGTGCTTTGACTGTTCCTGAATTGGTTGGTGTTGGAAGGGAAGTTCATTGCTTTGCTGTTAAAGCTGGGGTGGTATGGATTGGGGAAGTTAGAAATGCCCTTGTTACTATGTACTTGAAATGTGGGTCCCCGAGTGATGCCCTTCGGTTGTTTGTGATGTCTACTGATAAGAATCCTATCATGTGGTCTGCAATGGTCACTGGCTTGGCGCAGAGTGGGCACTCGGAGAGAGCTTTGGAGTTGTTCTCTGAAATGCATTATTCTGGCGTTAGGCCTAGTGAGTATACATTTGTTGGTGTCGTTAATGCTTGTAGTGACATTGGTGCCTTGAAGGAAGGGAAACAAGTTCATTGTTATTCCATCAAAATGGGATTTGAGCATCAGATGTATATAATGACTGCATTGGTCGATATGTATGCCAAATGTGGTAGCATTACTGATGCAAGGAAAGGGTTTGATCACCTACAGGAACCTGATGTTGTTTTGTGGACATCGATGATAGGGGGTTATGTTCAAAATGGAGAGAATGAAGAAGCTTTGAGTTTGTATGCCAGAATGGAGGCAAAGGGGATTTCACCCAACAGCCTAACCATTGCTAATGTCTTGAAAGGCTGTTCAAGTCTTGCTGCTTTGGAGCAAGGAAAACAAATCCATGCCCATACTGTTAAATATGGAATTGGTCATGAGATTGCAATTGGAAGTGCTCTTTCAAAGATGTATGCAAAGTGTGGTTGTATTGATGAGGGCAATATGGTTTTTGAGAGGATGCCTGAAAGGGATGTGGTTTCGTGGAATGCTATGATATCTGGCCTTGCTCAAAATGGATGCAGTGAAAAAGCTCTTGTGCTTTTTGACAAGATGACATCAGAGGGTGTAAAGCCTGATAGTGTCACCTTTGTGAACATTCTCTCTGCTTGTAGCCACATTGGATTGGTAGAAAGAGCATGGGGTTACTTCAAGATGATGTCCACTGAATTTGGTGCTGTACCAGGATTAGAGCATTATGCATGCATGGTTGATGTGTACAGCCGGGCAGGGAGGCTAACTGAAGCCAAGGAATTTATAGAATCAGCCACTTTAGAACATGGAATGTGTTTATGGAGAATCCTCTTAAGTGCATGTCGAAATCATCGTCATTATGAACTTGGAGCTTATGCAGGAGAAAAACTAATGGAGCTAGGCTCTCAAGAATCATCAGCTTATGTGCTATTATCAAGAATTTACATTGCACTGGGTAAATCAGATGATGCAGAGCGAGTCATGAGGTTGATGAAGCTTAGAAGAGTAGATAAGGAGCTCGGGTGTAGCTGGATCGAGTTCAAGAACCTTGTACATGTGTTTGCTGTTGGGGATCAGAGGCATCCTGAGATAGGGGATATACGTAGTTGGTTAAGAATCCTGACCAAACAAATGATGGATGAAGGTTATCAACCTGCTTATGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123168.p1 GENE.R_Transcript_123168~~R_Transcript_123168.p1 ORF type:complete len:697 (+),score=142.14,PPR|PF01535.16|0.92,PPR|PF01535.16|0.008,PPR|PF01535.16|0.00049,PPR|PF01535.16|0.0022,PPR|PF01535.16|1.9,PPR|PF01535.16|6.5e-06,PPR|PF01535.16|2.5e+03,PPR|PF01535.16|8,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|0.085,PPR|PF01535.16|4.4e-09,PPR|PF01535.16|0.1,PPR|PF01535.16|0.25,PPR|PF01535.16|1.1e+04,PPR|PF01535.16|9.3,PPR_2|PF13041.2|38,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|0.0072,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|14,PPR_2|PF13041.2|3.9e-09,PPR_2|PF13041.2|77,PPR_2|PF13041.2|4.4e-12,PPR_2|PF13041.2|3e+02,PPR_2|PF13041.2|4.7e-14,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|88,PPR_2|PF13041.2|44,PPR_3|PF13812.2|2e+02,PPR_3|PF13812.2|0.00058,PPR_3|PF13812.2|4.2,PPR_3|PF13812.2|64,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|4.1e-05,PPR_3|PF13812.2|52,PPR_3|PF13812.2|0.0003,PPR_3|PF13812.2|8.2e+03,PPR_3|PF13812.2|0.0025,PPR_3|PF13812.2|0.19,PPR_3|PF13812.2|9.6,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|3.6e+02,PPR_1|PF12854.3|3.9e+02,PPR_1|PF12854.3|18,PPR_1|PF12854.3|0.0011,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|0.02,PPR_1|PF12854.3|3.9e+03,PPR_1|PF12854.3|2.3e+02,PPR_1|PF12854.3|0.0016,PPR_1|PF12854.3|6.7e+02,PPR_1|PF12854.3|1.6e-06,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|3e+02,TPR_19|PF14559.2|13,TPR_19|PF14559.2|1.9e+03,TPR_19|PF14559.2|2.4e+03,TPR_19|PF14559.2|4.1e+03,TPR_19|PF14559.2|1e+03,TPR_19|PF14559.2|2.5e+02,TPR_19|PF14559.2|19,TPR_19|PF14559.2|0.15,TPR_14|PF13428.2|3.9e+03,TPR_14|PF13428.2|3e+02,TPR_14|PF13428.2|1.7e+02,TPR_14|PF13428.2|37,TPR_14|PF13428.2|22,TPR_14|PF13428.2|31 R_Transcript_123168:271-2361(+)
MSAAHRALFKELLKLTQEQNLQTGKALHAKIIKTDSFSNVYLANSIVNLYAKCGQLTKAKLAFDRITHKDDVSWSSILNAYCGSKSFHLVMYLFKHMRAENCLPNAHCFAGIFTSVSNLGDDLVGKQAHSLAIKTDRCGEVVVGSSILNMYCKTGLLCDARQLFDKMPERNSVSWATMISGYGSCGIAEEAVGLFQLIMRGEEERGNQFFLTSVLSALTVPELVGVGREVHCFAVKAGVVWIGEVRNALVTMYLKCGSPSDALRLFVMSTDKNPIMWSAMVTGLAQSGHSERALELFSEMHYSGVRPSEYTFVGVVNACSDIGALKEGKQVHCYSIKMGFEHQMYIMTALVDMYAKCGSITDARKGFDHLQEPDVVLWTSMIGGYVQNGENEEALSLYARMEAKGISPNSLTIANVLKGCSSLAALEQGKQIHAHTVKYGIGHEIAIGSALSKMYAKCGCIDEGNMVFERMPERDVVSWNAMISGLAQNGCSEKALVLFDKMTSEGVKPDSVTFVNILSACSHIGLVERAWGYFKMMSTEFGAVPGLEHYACMVDVYSRAGRLTEAKEFIESATLEHGMCLWRILLSACRNHRHYELGAYAGEKLMELGSQESSAYVLLSRIYIALGKSDDAERVMRLMKLRRVDKELGCSWIEFKNLVHVFAVGDQRHPEIGDIRSWLRILTKQMMDEGYQPAYG*

Click here to download the sequence:
Link to NCBI Protein BLAST