Transcript Information: R_Transcript_123176.p1


Annotated TAIR IDAT1G59720.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)CRR28
Annotation TypeOrtholog
Chromosome Positionchr1:21939868-21941784 | Reverse length=638
E-Value2.4E-165
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.87655462211926
Replicate 20.41518108167821
Replicate 30
Condition 2: 8 Hour
Replicate 10.55335288016373
Replicate 20.94749499327058
Replicate 30.82041177945252
Condition 3: 24 Hour
Replicate 10
Replicate 20.74763589459584
Replicate 31.0511044623651


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123176.p1 GENE.R_Transcript_123176~~R_Transcript_123176.p1 ORF type:complete len:354 (+),score=72.30,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.00023,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.25,PPR|PF01535.16|0.036,PPR|PF01535.16|12,PPR|PF01535.16|8.6e+02,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|7.2e-09,PPR_2|PF13041.2|3.8,PPR_2|PF13041.2|0.049,PPR_2|PF13041.2|2,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0028,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.0096,PPR_1|PF12854.3|0.088,PPR_3|PF13812.2|85,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|31,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|3e+02,DYW_deaminase|PF14432.2|1e+04,DYW_deaminase|PF14432.2|2.7e-07 R_Transcript_123176:888-1949(+)
ATGCCTGAGAGAAGTGTTGTGTCATGGAATGTTATGATTGATGTGTTGGTTCAGTTGAGGGAGCTTGTTAGGGCGTTGGAATTGTTTGGGCTGATTCAGGGTTTGTTTGAGCCAGATGGGTATAGTTTACAAAGTGTTTTATCTGCTTGTGCTGGGCTTGGTACTTTGGGCTCTGGCATGTGGGCTCATGCTTATATTTTGAGAGTTTGTGATGATTATTTGCAAAGCGATGTTTTGGTGAACAACTCATTGGTGGAAATGTATTGTAAATGTGGGATGTTAAGTTTGGCTAAGCAGGTCTTTGATGGGATGATTAAGCGCGACGTTAATTCGTGGAATTCGATGATTTTAGGACTAGCTATGCATGGCCATGTTGAGTTGGCAATGGAACATTTTGATCATATGACCAAGGTGGATGGGCTGAGGCCGAATTCCATCACTTTTGTTGGCATTTTGAGTGCTTGCAACCACAGGGGTATGGTTGAATTGGGCCGTGAGTACTTTGATAAGATGGTGAAGGATTATGGAATTGAACCTCGGCTGGAACATTTTGGGTGTATGGTTGATCTTCTTGCTTGTGCGGGATTGGTTGACGAGGCATTAGAACTTGTGTCAAATATGCCTATGAAACCTGATGTCGTGATATGGAGAAGTCTTCTTGATGCTTGCTGTAAGAAAAATGCAGGCATAGAACTAAGTGAAGAAGTAGCAAAGAAGATCCTTGAATCAGAAGCTACCTGTAGTGGTGTTTATGTGCTTCTCTCCAGAGTTTACGCCTCAGCTGCTCGATGGAATGATGTCGGATCAATAAGGAAGTTGATGACTGACAAAGGCATAACTAAAGAACCTGGTTGCAGTTCCTTGGAAATCAATGGAGTCAACCATGAGTTCTTTGCAGGGGACACATCTCACCCTCAAACAAAGGACATTTACCGAGTTTTGGATTTGATAAACGAGAGGCTTCTCTCGGAGGGATATCAGCCTGACCTTTCACAGGCACCCTTAGTTGTGAAGATGAGGACCGAAAGCAAGATGCTCTCAGGCTGCATAGTGAGCGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123176.p1 GENE.R_Transcript_123176~~R_Transcript_123176.p1 ORF type:complete len:354 (+),score=72.30,PPR|PF01535.16|0.0015,PPR|PF01535.16|0.00023,PPR|PF01535.16|0.00019,PPR|PF01535.16|0.25,PPR|PF01535.16|0.036,PPR|PF01535.16|12,PPR|PF01535.16|8.6e+02,PPR_2|PF13041.2|0.0023,PPR_2|PF13041.2|0.0016,PPR_2|PF13041.2|7.2e-09,PPR_2|PF13041.2|3.8,PPR_2|PF13041.2|0.049,PPR_2|PF13041.2|2,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0028,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|20,PPR_1|PF12854.3|0.0096,PPR_1|PF12854.3|0.088,PPR_3|PF13812.2|85,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|4.9,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|3.9,PPR_3|PF13812.2|31,PPR_3|PF13812.2|3e+02,PPR_3|PF13812.2|3e+02,DYW_deaminase|PF14432.2|1e+04,DYW_deaminase|PF14432.2|2.7e-07 R_Transcript_123176:888-1949(+)
MPERSVVSWNVMIDVLVQLRELVRALELFGLIQGLFEPDGYSLQSVLSACAGLGTLGSGMWAHAYILRVCDDYLQSDVLVNNSLVEMYCKCGMLSLAKQVFDGMIKRDVNSWNSMILGLAMHGHVELAMEHFDHMTKVDGLRPNSITFVGILSACNHRGMVELGREYFDKMVKDYGIEPRLEHFGCMVDLLACAGLVDEALELVSNMPMKPDVVIWRSLLDACCKKNAGIELSEEVAKKILESEATCSGVYVLLSRVYASAARWNDVGSIRKLMTDKGITKEPGCSSLEINGVNHEFFAGDTSHPQTKDIYRVLDLINERLLSEGYQPDLSQAPLVVKMRTESKMLSGCIVSD*

Click here to download the sequence:
Link to NCBI Protein BLAST