Transcript Information: R_Transcript_123176.p2


Annotated TAIR IDAT1G59720.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)CRR28
Annotation TypeOrtholog
Chromosome Positionchr1:21939868-21941784 | Reverse length=638
E-Value1.4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.27973886520642
Replicate 20
Replicate 30.17553055629236
Condition 2: 8 Hour
Replicate 10.37526229804207
Replicate 20
Replicate 30.13909280168879
Condition 3: 24 Hour
Replicate 10
Replicate 20.7605261686406
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123176.p2 GENE.R_Transcript_123176~~R_Transcript_123176.p2 ORF type:complete len:261 (+),score=33.52,PPR_2|PF13041.2|4.8e-06,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|7.3e-07,PPR|PF01535.16|40,PPR|PF01535.16|36,PPR|PF01535.16|0.0051,PPR|PF01535.16|8.3e-07,PPR_1|PF12854.3|52,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.00094,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.052,PPR_3|PF13812.2|9.7e+02,PPR_3|PF13812.2|0.031,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6e+04 R_Transcript_123176:142-924(+)
ATGCTCCTAGCTTCAACAACCACATGTCACCAACCCAACCTTCTCACTTACCTCAACCAATGTTCCTCCATGACCCAATTAAAGCAAATCCATGCCCAAGTAATCCGTACAACCCTAACCCACAACCCAAAAGACCTCCTTTTTCTTCACAGTAGACTTCTCCATTACACCTCCTTCATTGACGTTGACTATTCCTTCAAAATTTTTAAGCAAATTCACAACCCCAATTCATTTATATGGAATACCCTCCTTAGGGCCTGTGCTAGTAGCCCTTCACACTATAAATCCCTTGCCTTTAAACTCTTTCATGACATGTTGTGCGAGGGTTTTGTTCAACTTGATAAACACACCTTCCCTTTTGTTCTCAAAGCTTGTGCTTACCTTTTTGCTGAAGATGAAGGGAAACAGGCTCATTCATATGCTGTGAAACTTGGGTTTGGTTCTGATGTTTATGTTAATAACAGTCTCATCCATTTTTATGGGTCCTGTGGGTATTTGGTTTGTGCACAGAAAGTGTTTGATAAAATGCCTGAGAGAAGTGTTGTGTCATGGAATGTTATGATTGATGTGTTGGTTCAGTTGGGGGAGCTTGATAGGGCTTTAGAATTGTTTGGGCTGATGCAGGGTTTGTTTGAGCCAGATGGGTATAGTTTACAGAGTGTTTTATCTGCTTGTGCTGTAACAGTCTCATCCATTTTTATGGGTCCTGTGGGTTTTTGGATTGTGCACAGAAGGTGTTTGATAAAATGCCTGAGAGAAGTGTTGTGTCATGGAATGTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123176.p2 GENE.R_Transcript_123176~~R_Transcript_123176.p2 ORF type:complete len:261 (+),score=33.52,PPR_2|PF13041.2|4.8e-06,PPR_2|PF13041.2|0.033,PPR_2|PF13041.2|7.3e-07,PPR|PF01535.16|40,PPR|PF01535.16|36,PPR|PF01535.16|0.0051,PPR|PF01535.16|8.3e-07,PPR_1|PF12854.3|52,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.00094,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.052,PPR_3|PF13812.2|9.7e+02,PPR_3|PF13812.2|0.031,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6e+04 R_Transcript_123176:142-924(+)
MLLASTTTCHQPNLLTYLNQCSSMTQLKQIHAQVIRTTLTHNPKDLLFLHSRLLHYTSFIDVDYSFKIFKQIHNPNSFIWNTLLRACASSPSHYKSLAFKLFHDMLCEGFVQLDKHTFPFVLKACAYLFAEDEGKQAHSYAVKLGFGSDVYVNNSLIHFYGSCGYLVCAQKVFDKMPERSVVSWNVMIDVLVQLGELDRALELFGLMQGLFEPDGYSLQSVLSACAVTVSSIFMGPVGFWIVHRRCLIKCLREVLCHGML*

Click here to download the sequence:
Link to NCBI Protein BLAST