Transcript Information: R_Transcript_123216.p2


Annotated TAIR IDAT4G02460.1
Annotated Gene NameDNA mismatch repair protein, putative
Annotated Gene Symbol(s)PMS1
Annotation TypeOrtholog
Chromosome Positionchr4:1076306-1080510 | Reverse length=923
E-Value1.5E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7456594832656
Replicate 25.3251486563075
Replicate 36.3906478076222
Condition 2: 8 Hour
Replicate 14.2584112951731
Replicate 26.8054857777521
Replicate 36.8397373352183
Condition 3: 24 Hour
Replicate 18.7339484018439
Replicate 25.8334561558411
Replicate 38.168237618661


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123216.p2 GENE.R_Transcript_123216~~R_Transcript_123216.p2 ORF type:complete len:276 (+),score=75.73,MutL_C|PF08676.7|2.3e-36 R_Transcript_123216:2308-3135(+)
ATGAAAGACCTCATGAAAAAGAGGCAGCAGAAGTTGATATTCCAGTCATGTTCTAATGGTGAAAGAACAACAACCAAAAGGTCATATGCTGCTGCAACACTTGAGTTATCTCAAGCAGACAATGAAGACTGGAAGGCCAGGGCTCTAGCTGCTGCAACCACTGAACTGGAAAGGCTTTTCAGGAAAAAAGATTTCAGCAGGATGAAGGTGATTGGACAATTCAATCTTGGCTTTATAATTGGGAAGTTAGACCAAGACTTGTTTATTATAGATCAGCATGCAGCTGATGAGAAGTACAATTTTGAGCGCCTCTCACAATCAACTATCTTGAACCAGCAGCCATTGCTTCGGCCGATCAAGCTAGAATTGTCACCAGAGGAGGAAGTAATTGCCTCGATGCATATGGATATTATCAGGAAAAATGGTTTTGCCTTGGAAGATGATGCACATGCTCCTTGTGGCCACCGTTTTAAGTTGAAAGCTGTGCCGTTCAGTAAAAACATAACATTTGGAGTTGAAGATGTGAAAGAGCTTATTTCCACTCTTTTGGATGATCAAGGAGATTGCTCAATTATGGGTACTTACAAGATGGATACCACTGCATCAATATGTCCATCTAGAGTACGTGCAATGTTAGCATCACGTGCCTGCAGATCTTCTGTCATGGTTGGAGATGCCCTTGGAAGAAATGAAATGCAGAAGATATTTGAGCACTTGGCTGAGCTGGATTCTCCATGGAACTGTCCGCATGGAAGACCAACTATGCGTCACTTGGTTGATTTGTCCATAATCCGTGAAAAGGCAACTCCAAACGAAAATATTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123216.p2 GENE.R_Transcript_123216~~R_Transcript_123216.p2 ORF type:complete len:276 (+),score=75.73,MutL_C|PF08676.7|2.3e-36 R_Transcript_123216:2308-3135(+)
MKDLMKKRQQKLIFQSCSNGERTTTKRSYAAATLELSQADNEDWKARALAAATTELERLFRKKDFSRMKVIGQFNLGFIIGKLDQDLFIIDQHAADEKYNFERLSQSTILNQQPLLRPIKLELSPEEEVIASMHMDIIRKNGFALEDDAHAPCGHRFKLKAVPFSKNITFGVEDVKELISTLLDDQGDCSIMGTYKMDTTASICPSRVRAMLASRACRSSVMVGDALGRNEMQKIFEHLAELDSPWNCPHGRPTMRHLVDLSIIREKATPNENIL*

Click here to download the sequence:
Link to NCBI Protein BLAST