Transcript Information: R_Transcript_12324.p1


Annotated TAIR IDAT4G36810.1
Annotated Gene Namegeranylgeranyl pyrophosphate synthase 1
Annotated Gene Symbol(s)GGPS1
Annotation TypeOrtholog
Chromosome Positionchr4:17343513-17344628 | Forward length=371
E-Value1.9E-164
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.571681128304
Replicate 218.398273344584
Replicate 320.072318045113
Condition 2: 8 Hour
Replicate 117.49873681836
Replicate 220.610408767759
Replicate 322.643675874927
Condition 3: 24 Hour
Replicate 126.552211389617
Replicate 222.834990265497
Replicate 326.862183024829


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12324.p1 GENE.R_Transcript_12324~~R_Transcript_12324.p1 ORF type:complete len:396 (+),score=81.82,polyprenyl_synt|PF00348.13|1.5e-55 R_Transcript_12324:552-1739(+)
ATGAGCAGTAGCAGTAGTGTGAATGCTGTGGGTGCTTTGCTTCAGACATGTTCACTCATTAGCACCAATTCCAGATCTAGATCTTCAATATCTTCTTTGAAGAATAATTATGGCCTCCACAACACCACCACCACCAACAGCAACAACCCTTTATTCTCTTCTATTTCCTCACTTTCTCTCTCCTCTTCCTCCAGAAGAAAACACACCACGTCCCCAATCTCAGCCATCCTCACCAAACAAGAAACAGCAATTGACCCACCAGAAAACAAGAAACCCCAACAACAACAACAACCCCCATTTGATTTCAAAAGCTATATGGTGGAGAAAGCCAATTCTGTGAACCAAGCCCTAGATTTGGCAGTTCCTTTACGCCATCCTGAGAAAATCCATGAGGCTATGAGGTACTCCCTCTTAGCCGGTGGCAAGAGGGTCCGGCCTGTCTTATGCATCGCCGCTTGCGAGCTCGTTGGTGGCGATGCATCGGTGGCTATGCCCTCTGCTTGTGCTGTTGAGATGATACACACAATGTCTTTAATCCATGATGATCTCCCCTGCATGGACAACGACGACCTCCGGAGGGGAAAGCCTACCAATCACAAGGTCTTCGGTGAGGACGTCGCTGTCCTTGCAGGGGATTCTCTCCTAGCCTTGGCCTTTGAGCACCTCGCCACTGCTACCCCTCCGGGACAGGTCCCCCCGGAAAGAATCATTCGGGCTACCGGGGAATTGGCACTCGCTATCGGTGGTGAGGGGCTCGTGGCAGGACAGGTGGTAGATATCGACTTTGAAGGGGCCGAAAATGTTGGGATTGAGCAGCTCGAGTTTATTCATATCCATAAGACGGCTAAGCTCCTTGAGGCCGCGGTTGTTCTGGGCGTGATTGTAGGTGGTGGGAGCAACGAGGAGGTGGAGAAATTGAGGATGTTTGCTAGAAGGATAGGGTTGCTGTTCCAGGTTGTGGATGATATTCTAGATGTGACTAAATCTTCAGAGGAATTGGGTAAGACTGCAGGCAAGGACTTGGTTGCTGATAAGGTTACATATCCAAAATTAATGGGTATTGAAAAGTCAAAAGATTATGCTCAAAGGTTGAATAAGGAAGCCAAAGAAATGCTTGCTGGGTTTGATCTAGAGAAGGCTAAGCCTTTGATTGCTCTTGCAGATTATATTGCTTATAGGCAGAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12324.p1 GENE.R_Transcript_12324~~R_Transcript_12324.p1 ORF type:complete len:396 (+),score=81.82,polyprenyl_synt|PF00348.13|1.5e-55 R_Transcript_12324:552-1739(+)
MSSSSSVNAVGALLQTCSLISTNSRSRSSISSLKNNYGLHNTTTTNSNNPLFSSISSLSLSSSSRRKHTTSPISAILTKQETAIDPPENKKPQQQQQPPFDFKSYMVEKANSVNQALDLAVPLRHPEKIHEAMRYSLLAGGKRVRPVLCIAACELVGGDASVAMPSACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDSLLALAFEHLATATPPGQVPPERIIRATGELALAIGGEGLVAGQVVDIDFEGAENVGIEQLEFIHIHKTAKLLEAAVVLGVIVGGGSNEEVEKLRMFARRIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVTYPKLMGIEKSKDYAQRLNKEAKEMLAGFDLEKAKPLIALADYIAYRQN*

Click here to download the sequence:
Link to NCBI Protein BLAST