Transcript Information: R_Transcript_123241.p2


Annotated TAIR IDAT5G41340.1
Annotated Gene Nameubiquitin conjugating enzyme 4
Annotated Gene Symbol(s)UBC4, ATUBC4
Annotation TypeOrtholog
Chromosome Positionchr5:16538296-16539956 | Reverse length=187
E-Value1.2E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.9767736895357
Replicate 28.9984144641277
Replicate 311.382229861442
Condition 2: 8 Hour
Replicate 17.7563920019224
Replicate 28.194360426273
Replicate 36.3136036940476
Condition 3: 24 Hour
Replicate 16.7019685695782
Replicate 28.7673078819686
Replicate 37.4771661973873


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123241.p2 GENE.R_Transcript_123241~~R_Transcript_123241.p2 ORF type:complete len:161 (+),score=22.46,UQ_con|PF00179.22|3.5e-40 R_Transcript_123241:448-930(+)
ATGTCTTCACCCAGTAAACGAAGAGAGATGGATGTTATGAAATTGATGATGAGTGACTACTCAGTGGATATGATAAATGATGGGCTGAATGAATTCAATGTTTTATTCAATGGTCCTAAAGATAGCCTTTATGAAGGCGGAGTGTGGAAGATCCGGGTTGAGCTTCCAGACGCTTATCCCTATAAATCTCCTTCCATTGGGTTTGTGAACAAGATATTCCACCCAAATGTCGATGAACTGTCTGGTTCTGTGTGCCTGGATGTCATCAACCAATCATGGAGTCCTATGTTCGATCTTTTAAATGTGTTTGAAGTTTTTCTTCCGCAACTTCTACTTTACCCGAATCCTTCAGACCCTCTCAATGGCGATGCTGCCTCATTAATGATGAAGGATCGACAGCAATATGAACAGAAAGTAAAAGGTAAGATAATAAGGGGTGGACAATTCAGTTGGCTTCTGGCTATGACTTGCACAGCTTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123241.p2 GENE.R_Transcript_123241~~R_Transcript_123241.p2 ORF type:complete len:161 (+),score=22.46,UQ_con|PF00179.22|3.5e-40 R_Transcript_123241:448-930(+)
MSSPSKRREMDVMKLMMSDYSVDMINDGLNEFNVLFNGPKDSLYEGGVWKIRVELPDAYPYKSPSIGFVNKIFHPNVDELSGSVCLDVINQSWSPMFDLLNVFEVFLPQLLLYPNPSDPLNGDAASLMMKDRQQYEQKVKGKIIRGGQFSWLLAMTCTAY*

Click here to download the sequence:
Link to NCBI Protein BLAST