Transcript Information: R_Transcript_123269.p1


Annotated TAIR IDAT5G52900.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21452893-21453692 | Reverse length=235
E-Value5.3E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.299452019588
Replicate 28.8166283133373
Replicate 312.494584143356
Condition 2: 8 Hour
Replicate 111.977933935232
Replicate 215.681657395117
Replicate 313.201171360281
Condition 3: 24 Hour
Replicate 113.019362540386
Replicate 210.597981544823
Replicate 312.696763757767


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123269.p1 GENE.R_Transcript_123269~~R_Transcript_123269.p1 ORF type:complete len:231 (+),score=37.27 R_Transcript_123269:1107-1799(+)
ATGGCTATGATCGAAACTTCACAGGCTCTGTCAATAGAGAGCTTCTCTTACAGCTGGTTGATAAACTTACAACCATCCCTTGAAAGCATCAGTGACTCCTTCAGGGCTGCCTTGGATTCATCTGATGAGTCTTCCTTCATTGAGATGGATCCGAATATGCCACCTTCCAAGAGGTTCAAGAAGCTCGACAGAGATTTTGATTTTGATTTTCCGTTGTCAGAGCAATCTAAGGCGGCCATTGTACATGCTGATGAGCTCTTCAGCAACGGTCTGTTAGTGCCCCTTGTTGAATCCTCAAAGATTGGCAGCGATTTGAGTCCAAATGCCTCTCCTTTCTCAATTTGTCAGAACAGGAGGGCTTCTTTTGCGGCTGATAGGAAGTTTCGTTGTTCTTCCTTGAGAAGGTGTAGGAGCTTATTGTCTAGGAAAATGTTTGAGAAATACTTGTATTTTCTGTGCCCATTTTTGTCTAAAGTAAGATGTTGCAGATCAAAGTCTAGAAAAGATAGAGCAGCTGATAACAGAATCTGGGCATTGAAGAATAATACAGCTTCTAGTATTACAACATATTCACCCCAAGCATCACCGCGAACAAGTGTAGGTTCATCCGTCGGTGATTGGAGGAGGTCTTGTGATTCAGAGAGCTCGATTCACGAGGCCGTTCTTCATTGCAAAAGATCTATTGGTATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123269.p1 GENE.R_Transcript_123269~~R_Transcript_123269.p1 ORF type:complete len:231 (+),score=37.27 R_Transcript_123269:1107-1799(+)
MAMIETSQALSIESFSYSWLINLQPSLESISDSFRAALDSSDESSFIEMDPNMPPSKRFKKLDRDFDFDFPLSEQSKAAIVHADELFSNGLLVPLVESSKIGSDLSPNASPFSICQNRRASFAADRKFRCSSLRRCRSLLSRKMFEKYLYFLCPFLSKVRCCRSKSRKDRAADNRIWALKNNTASSITTYSPQASPRTSVGSSVGDWRRSCDSESSIHEAVLHCKRSIGM*

Click here to download the sequence:
Link to NCBI Protein BLAST