Transcript Information: R_Transcript_123353.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value4E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3585286626884
Replicate 21.4154809269414
Replicate 33.47461750054
Condition 2: 8 Hour
Replicate 13.5765870147662
Replicate 22.386835702149
Replicate 31.6316054490236
Condition 3: 24 Hour
Replicate 12.9664582372876
Replicate 21.7346832835285
Replicate 31.352610963797


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123353.p1 GENE.R_Transcript_123353~~R_Transcript_123353.p1 ORF type:internal len:178 (-),score=53.39,CENP-F_leu_zip|PF10473.5|35,CENP-F_leu_zip|PF10473.5|7.2e-08 R_Transcript_123353:2-532(-)
AGGGCACGGTTTTCACAGCTCGAGACAACATCAAAAGAGAAAGAAGACGAGATATCTCTGCTCCAAAAGGAGCTGGAGGAGAATCAAAACGAGTTGAATTCCACAATTGAAGGCTTGAGAATACAGGTCAATCATTTAACACATGAGGCAGAAACAGTGCATGCTGAGAGAAGTAAAGTAGAGGAACAAATGGCTAGCAGACATGTTGAAGTATCAGCCCAGGTCAAGGAATTGCAGGACCGGATCAGTGGGTTGGAGCATGAATTGGAGACCTTGCAGGTACAGGACAGAGAGATGAAGTTGGAACTTGAGAGAAAAACTGACGATGTTGCAGAGTACCTAGTTCAGATAGAAGGTATGCATGAGAAAATAACTAGCAGTGATGCTGAGATGAAGAGTCTTTTTGAGGAAAAGGAAGACCTAGCAGCCAAGTTAAAGGAGCGAGAACTAGAGGTAGAGACACTTAGCAGCCACAAGATGGGGCTGGAAGAGCAAAACAAGACTAGGAGCAACGAGGCCACTCAATTAAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123353.p1 GENE.R_Transcript_123353~~R_Transcript_123353.p1 ORF type:internal len:178 (-),score=53.39,CENP-F_leu_zip|PF10473.5|35,CENP-F_leu_zip|PF10473.5|7.2e-08 R_Transcript_123353:2-532(-)
RARFSQLETTSKEKEDEISLLQKELEENQNELNSTIEGLRIQVNHLTHEAETVHAERSKVEEQMASRHVEVSAQVKELQDRISGLEHELETLQVQDREMKLELERKTDDVAEYLVQIEGMHEKITSSDAEMKSLFEEKEDLAAKLKERELEVETLSSHKMGLEEQNKTRSNEATQLR

Click here to download the sequence:
Link to NCBI Protein BLAST