Transcript Information: R_Transcript_123354.p1


Annotated TAIR IDAT5G41790.1
Annotated Gene NameCOP1-interactive protein 1
Annotated Gene Symbol(s)CIP1
Annotation TypeHomolog
Chromosome Positionchr5:16727530-16732391 | Forward length=1586
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65974557667658
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.88503126315344
Replicate 20
Replicate 30.21869410386008
Condition 3: 24 Hour
Replicate 10.27660008708077
Replicate 20.26572601072985
Replicate 30.79112185615291


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123354.p1 GENE.R_Transcript_123354~~R_Transcript_123354.p1 ORF type:3prime_partial len:83 (+),score=27.30 R_Transcript_123354:87-332(+)
ATGGGGCTGGAAGAGCAAAACAAGACTAGCAGCAACGAGGCCACTCAATTAAGAGAGGAAATTGCGAGTTTCCAAGGCAGGGTTCTTGAGTTGGAGAAAGAAACACAAGATAGAGAGGAGAATTCTTCTGCCCTACGGAGAAAGCTTGAGGAGGGAGAGATTGAAGCTTCTTCAAAGATTATAGCGATGATGGCAGAAATAAGCAATTTAAAACAGGAGCTGGAAACAGTTCAGACTGTAAAAGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123354.p1 GENE.R_Transcript_123354~~R_Transcript_123354.p1 ORF type:3prime_partial len:83 (+),score=27.30 R_Transcript_123354:87-332(+)
MGLEEQNKTSSNEATQLREEIASFQGRVLELEKETQDREENSSALRRKLEEGEIEASSKIIAMMAEISNLKQELETVQTVKG

Click here to download the sequence:
Link to NCBI Protein BLAST