Transcript Information: R_Transcript_123498.p1


Annotated TAIR IDAT1G22860.1
Annotated Gene NameVacuolar sorting protein 39
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8083400-8088867 | Forward length=961
E-Value7E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.94820576388149
Replicate 20.40901883927853
Replicate 30.89247029595399
Condition 2: 8 Hour
Replicate 10.63599649213624
Replicate 20.43560159430881
Replicate 31.5322788186041
Condition 3: 24 Hour
Replicate 11.7889200437172
Replicate 21.4321596682193
Replicate 31.4212795251232


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123498.p1 GENE.R_Transcript_123498~~R_Transcript_123498.p1 ORF type:internal len:154 (+),score=35.27 R_Transcript_123498:3-461(+)
TTTATTAAGCGGTTAGGGGGTGGGATTAGATCGAATGGAGTGAAAGGTAAGGAGTTTGAATTTGGTAGAGATGATAGTTGTGTTTTTGCTGTGGCAGCAGGGAAGAAGGTGGTGCTTGTTGAACTAGGTTTGGGTCGGGGTCTTGATGGGTCGTTGGTGGTTTTGAAAGAAATTCAGGGTATTGAAGGCGTGAAGTCAATGTCGTGGCTTGATGATTCGATAATCTTTGGGACCACAAGTGGGTATAGTTTGTTGTCTTGCGGTACAGGGCAGGTTAATTTGATTTTTTCGCTTCCTGATATGGAGACTACAGCTTGTGTCAAATCAATGTCGAAAGAACATAATGTGCTTTTGCTTGTTGACAATGTGGGGATCATTGTGAATGGTCAAGGGCAGCCTGTTGGTGGCAGCTTGGTCTTTCGTTGTGCTCAGGAGTCCATTGCTGAGTTGTCGTCATAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123498.p1 GENE.R_Transcript_123498~~R_Transcript_123498.p1 ORF type:internal len:154 (+),score=35.27 R_Transcript_123498:3-461(+)
FIKRLGGGIRSNGVKGKEFEFGRDDSCVFAVAAGKKVVLVELGLGRGLDGSLVVLKEIQGIEGVKSMSWLDDSIIFGTTSGYSLLSCGTGQVNLIFSLPDMETTACVKSMSKEHNVLLLVDNVGIIVNGQGQPVGGSLVFRCAQESIAELSSY

Click here to download the sequence:
Link to NCBI Protein BLAST