Transcript Information: R_Transcript_12356.p1


Annotated TAIR IDAT2G27180.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:11620473-11620970 | Forward length=165
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.548460707344
Replicate 217.681095087409
Replicate 321.379621756409
Condition 2: 8 Hour
Replicate 19.1070234540631
Replicate 212.867314462998
Replicate 39.7445488593656
Condition 3: 24 Hour
Replicate 110.955304501641
Replicate 215.090440293553
Replicate 312.518231101629


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12356.p1 GENE.R_Transcript_12356~~R_Transcript_12356.p1 ORF type:5prime_partial len:285 (+),score=6.32 R_Transcript_12356:1-855(+)
CTCCCCTCAGAAACCTCCCTTTTCTTTTTCGCCGTTTCCCATTTTCAGTATTCTTCTTCTATAAACCTCAACAAATGCTCTAATTCTATGGTAATTGGAAATCAGATCGTGATTCGGTCGTCGCCGGTGGTGGCGCTGAATCGCCGGCAACCACTGCTCGCTGGAAACCTAACTCCGGCGACAACTCCGCCTACAACACCAACACTTCCACGGAAAAGAACATCATCGAACGTCGGAGAAGTCGCCGGAGGTACAGCGGCGGGGAGCTTTGTCGTTTGCTGTTGTTGTCCCTGCGTTTTGGTGGAATTCCTAATCTTAACGGTCTACAAAGTTCCGTCTACGATAATCCGTCGGATTTGGAGAAAACAGCGTCAAAAAGTGAAAACGATCAAGAAAAAGAAAGGAGTTGGTGGTCTTTTACACATGGCGAGTAGTACGGTGGAGGGATCCGATGCGAGTGAGTCGCACCATAAGGTGGTGTACGGTGATGAGGTGTCGGATGTTGATTTGAGGGAGTTTGAGAAGGTCAAGGTCTCTATTGATGGCTCTGCCATTGAACTAGACAAACAGATGTGGGACCAGTTTCAGAATACCGGCTTCTGGACAAAAAAAAAGATGAAAACGTACGGAGATTTTGATTGGGCGTGTGCCAGCACCACCGTAAGGTGGTGTGGGAGCACTACGGGACAGGGATGGAAATTTGGGATTTGTTGTGTACAGTCACAGATGACAGAAATGAGTAAATATATACAAATGAAAAATGAAAAATCTTTGCTAAATTTCAAGCTGTTTGGTAAATATGTCTTTCCTTCCTTTGTCTTTTACTTAGCCTTATTAGTAGTAGACTGTATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12356.p1 GENE.R_Transcript_12356~~R_Transcript_12356.p1 ORF type:5prime_partial len:285 (+),score=6.32 R_Transcript_12356:1-855(+)
LPSETSLFFFAVSHFQYSSSINLNKCSNSMVIGNQIVIRSSPVVALNRRQPLLAGNLTPATTPPTTPTLPRKRTSSNVGEVAGGTAAGSFVVCCCCPCVLVEFLILTVYKVPSTIIRRIWRKQRQKVKTIKKKKGVGGLLHMASSTVEGSDASESHHKVVYGDEVSDVDLREFEKVKVSIDGSAIELDKQMWDQFQNTGFWTKKKMKTYGDFDWACASTTVRWCGSTTGQGWKFGICCVQSQMTEMSKYIQMKNEKSLLNFKLFGKYVFPSFVFYLALLVVDCI*

Click here to download the sequence:
Link to NCBI Protein BLAST