Transcript Information: R_Transcript_12364.p1


Annotated TAIR IDAT5G27650.1
Annotated Gene NameTudor/PWWP/MBT superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9785511-9789094 | Forward length=1072
E-Value2.9E-194
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3135334768551
Replicate 24.5697830317825
Replicate 36.1405456245148
Condition 2: 8 Hour
Replicate 16.9959614134986
Replicate 27.9860292289949
Replicate 310.585897286175
Condition 3: 24 Hour
Replicate 19.8969370653884
Replicate 26.8945851321805
Replicate 39.067763370286


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12364.p1 GENE.R_Transcript_12364~~R_Transcript_12364.p1 ORF type:complete len:1190 (+),score=344.73,PWWP|PF00855.13|1.2e-18 R_Transcript_12364:344-3913(+)
ATGATATCTGTTATGAACAACGATTTCGATTTGGAAAGGAACCAAAAGCAGGCTTCTTCTACTGCTTCTGAACCAGAAGAAGAGCCTTCTAGGGTTTCTGATCATGATAGGGCGGGTGAAGGATTAGTTGAGGGTGAAGTTAATTTGAATGAGGGAACTAGGGTTTCTTCTTTAGGGCATGATTTGGGGGAACTTAAAAGTGAAGCTACGGTTTTGTCAGGGAGTGGGAATGTAGAGGAGGAGGAGAAAGATAAGGTTAGGGTTTTAGATGGGGCTCATCATTGTTTGAATGGGGATTCTGGTGATATGTTGAGAACTAGGGTTCCTTCTGGAAATGATGGGGATGGAGAAATGGGGTTTAGTAGTAGGGTTAAGGATGAGGAATCTAGGGATTCTAAAAATGAGGTGGTGGTGGTACCTGAATCGAGTGGCGTTAGTAGCAGTAGTGATCGTGTTGAGGGGAGGGATTTGAGTCGTGGGACGGTGAAACAGAAAAGTGGTGGTCCTAAAGATGAGGGTTTGGTGGAGGCGGATGGTATGGTTGGTCAGTTTAGGATGGAGAAGCGTAGTGATTTTCGGGGTTTGGTGAGTAGAGATGTCGGTGGTAGTGATATGAATGGTTTTGTTGCAGCCGGATCGATCAAGGTTTTAGGTGGTTTTGAAATGGGGGATATGGTGTGGGGTAAGGTGAAATCTCATCCTTGGTGGCCAGGTCATATTTTCAGTGATGCTTTTGCTACTACTTCAGTTCGGCGTACAAGGAGGGATGGGCATGTGTTGGTTGCCTTCTTTGGTGATAGTAGTTATGGGTGGTTTGATCCTATTGAACTCATTCCTTATGACCCTAACTATGCTGAGAAATCACAGCAGACAACTTCTAGGAGTTTCCTGAGGGCCGTGGAGGAATCAGTTGATGAGGCCAGTCGGAGGAGTGCTCTTGGTTTAAGTTGTCGGTGCCGTAATCCACATAATTTCCGGCCAACAAATGTGCCTGGGTACATGGCTGTTGATGTGGTTGATTATGAACCTGGTGCAGTTTATTCAGTGAGTCAAATCCAGAGAGCAAGAGAGAGTTTTCGTCCTGCTGACACTCTTTTGTTCATAAGGGACTTGGCTGCAGCTCCTAGGAGTGGTGGAGATAAGAGCCTTGATTTTATAAAACAAAAGGCTACAGCCCTTGCTTACCGCAGGTCCATATTTGAAGAGTTTGATGAGACTTATGCTCAAGCTTTCGGACAGCAACCAGTGCGGCCTTCACAAGAGTCAGAACCACCAACTGATAAAGGACCTTCACGAGCTCCTTTGAGTGGCCCATTGGTCTTCGCAGAGACTCTTGGTGGTCGGAAGAGCTCTTCTAAAGCTTCGAAGTCGAAGGAGCTTTCTAAGAAGGATAGATACCTTTTTAAGCGGAGAGATGAAGCTGGGGATTTGAGGACCACCCAGATTAGTCAAGCTCATCCAAGTTCCTCTTCATCGTCTGCCTATGAGGATGGAACATCTGACTCAGCAGCCGGTTATGTGTTGCAGAAAAGGGATCATGCAGGTTACACCAAAAGTGACCTGGGTGGAATTCCTGCCAGTGATCAGGTGGCAACTTCTGCCCACCATGTGGCCACAAAAGAAGTTCCTACAGCAGGTGTGGATGTTTCAGCGAAAACAGTTTCCCTTGATGCAAGTAATTTATTTCAACAATCAGAGTCAAGCGTAGCAATGGCAGTCGACATAAGTGATGTGCATGGTCAAGTTCCAGACAGTCATGTCAGCAGCATTACTTCTCCTGATGCTGTTCATCTCTCTGTGAGCAGTGCCCCAGTGAAGAAGAAGAAGAAGAAAAAGGATGCTAAACGGCTTGCCGGGGAACGGGGCAGTGAAAAACCTGATATTCCTGTGAAGAAGATGAAGAAGCTGAGGAAAACAGATGGTGAGAGGAGCATTGATCATCCGGAGAGACCTTCCTCTGGGTCTGATGCAACAACCTATATAGTCAAACCAGCAGGGAGGTCAATGCAAAATACTGCTGCCTCCAGAGAGGACTCTCAAGTAAGCAACCGAAAGAAAGACATTGAAATGAGTAATTCTATTCCTCAGCAAGGGGGGTCAGTGCCAGTGGAAAAAGTTGGGGAGGCTGAGTTGGCACAGTTGTTGGCTGACTTGCAAGGTCTTGCTCTGAACCCTTTCCATGGTGTGGAAAGGAATAGTCCAGCAATTACGAGGCAGTTCTTCCTGAAATTCCGGTCTGCAGTTTTCTTGAAAAGCTCCAGTGCTTTATCTCCCCCTGAATCAGAACCCAGTGAGGGCCGGGCTGTCAGATACCTGCCTACTGCTGAATCTGCTGATAAGCCTCCAGCTGAAAGCAATAAAGCTACACCGTCCTTGAAATCGTCAAAGATTGTGGCAAGGCATGATGACCCTGCAAAGGGAGGGCGGAAACGAATACCATCTGAGCGTCAGGAGGAGATTGCTGCCAAGAGGGCTAAGAAAATCACTGAAGTAAAATCCTTGAGTGCTGAAAAGAGGGCCCTTCTTAAGAATCCCGAAATGCAGCGGGCAGATGTAAAAATGAAAGTTTCTGCAGCCCAGCAGCCACCATCAAAACTGATAAAGACAGAGCAACATATTAAGAAAATGGACCGTCCGAGGGTTGAAGAGCCCACATATCTGGTGATGAAGTTCCAGTCAGGCTCCTCACTCCCTTCACTTGTCGAGCTAAAGGCAAGGTTTGCCCGATTTGGTCCAATGGACACATCACTCAGCCGGGTCTTCTACACAACCAACACCTGCCGGGTTGCCTTCCTGTACAAACAAGACGCAAATGTTGCTTACAGGTACGCGATGGGGAGCAAGTCCGTCTTCTCAAATGTGAAATTCATGTTGAAGCCCGTGGCAGCACCTGAACCTCAGCAGCCTAGCAGTGGCAAGCCGGAGGACTTGCATGGTGAACCAGCGTCTATTCGGGATTCATCTGCCATGGATCGACCTACAGTGCCAGCTACACCTCTTGTGCAGCAGCAGCCTATGCAGCAGCTGAAGTCATGCTTGAAGAAGTCTTCGGGGGGTGATGAGCCCAGTGGTCCTAGCAGCGGCAATGGCACTGTTAGAGCACCCCGAGTGAGGTTCAACATGGGCGAGGAAAAAGGTGGTGGTGCAAGTAACAGGGGAGGATTTCAAGTGCAAGTGGACTCTAGGAATGCATTATCATCGTCATATGAAGGTGGTCCATCATCTTCAACTACTTCTGTTGGTATGGATGTTGTTAGTAACAATCAAAGGTTCATGCCTTCACATCCATTGCAAGCTCCTCTCCTTCCCTCTCCCCAATTTCCGAGGTCTTCTATTAATAACCCACAGCATCATGTTGACGTAGCCCAAAGAAATAATTATATCTATAATCTCGCTGCTACCACTGGGCCAGCCGGTCCAGCACTGCCACCGATGCCTCCAATTCAAGCCCCACCGCCACCACCTAACATAGACATCTCTCAGCAAATGATGAGCCTCTTGACAAGGTGTCACGATGTCGTGACCAACGTGACGAGCATTTTAGGTTATGTACCATACCACCCTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12364.p1 GENE.R_Transcript_12364~~R_Transcript_12364.p1 ORF type:complete len:1190 (+),score=344.73,PWWP|PF00855.13|1.2e-18 R_Transcript_12364:344-3913(+)
MISVMNNDFDLERNQKQASSTASEPEEEPSRVSDHDRAGEGLVEGEVNLNEGTRVSSLGHDLGELKSEATVLSGSGNVEEEEKDKVRVLDGAHHCLNGDSGDMLRTRVPSGNDGDGEMGFSSRVKDEESRDSKNEVVVVPESSGVSSSSDRVEGRDLSRGTVKQKSGGPKDEGLVEADGMVGQFRMEKRSDFRGLVSRDVGGSDMNGFVAAGSIKVLGGFEMGDMVWGKVKSHPWWPGHIFSDAFATTSVRRTRRDGHVLVAFFGDSSYGWFDPIELIPYDPNYAEKSQQTTSRSFLRAVEESVDEASRRSALGLSCRCRNPHNFRPTNVPGYMAVDVVDYEPGAVYSVSQIQRARESFRPADTLLFIRDLAAAPRSGGDKSLDFIKQKATALAYRRSIFEEFDETYAQAFGQQPVRPSQESEPPTDKGPSRAPLSGPLVFAETLGGRKSSSKASKSKELSKKDRYLFKRRDEAGDLRTTQISQAHPSSSSSSAYEDGTSDSAAGYVLQKRDHAGYTKSDLGGIPASDQVATSAHHVATKEVPTAGVDVSAKTVSLDASNLFQQSESSVAMAVDISDVHGQVPDSHVSSITSPDAVHLSVSSAPVKKKKKKKDAKRLAGERGSEKPDIPVKKMKKLRKTDGERSIDHPERPSSGSDATTYIVKPAGRSMQNTAASREDSQVSNRKKDIEMSNSIPQQGGSVPVEKVGEAELAQLLADLQGLALNPFHGVERNSPAITRQFFLKFRSAVFLKSSSALSPPESEPSEGRAVRYLPTAESADKPPAESNKATPSLKSSKIVARHDDPAKGGRKRIPSERQEEIAAKRAKKITEVKSLSAEKRALLKNPEMQRADVKMKVSAAQQPPSKLIKTEQHIKKMDRPRVEEPTYLVMKFQSGSSLPSLVELKARFARFGPMDTSLSRVFYTTNTCRVAFLYKQDANVAYRYAMGSKSVFSNVKFMLKPVAAPEPQQPSSGKPEDLHGEPASIRDSSAMDRPTVPATPLVQQQPMQQLKSCLKKSSGGDEPSGPSSGNGTVRAPRVRFNMGEEKGGGASNRGGFQVQVDSRNALSSSYEGGPSSSTTSVGMDVVSNNQRFMPSHPLQAPLLPSPQFPRSSINNPQHHVDVAQRNNYIYNLAATTGPAGPALPPMPPIQAPPPPPNIDISQQMMSLLTRCHDVVTNVTSILGYVPYHPL*

Click here to download the sequence:
Link to NCBI Protein BLAST