Transcript Information: R_Transcript_123655.p1


Annotated TAIR IDAT4G21170.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11286756-11288513 | Reverse length=551
E-Value1E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7349293042659
Replicate 21.593778579455
Replicate 32.4947932035414
Condition 2: 8 Hour
Replicate 11.7374458625933
Replicate 22.2508478420995
Replicate 33.5344720349928
Condition 3: 24 Hour
Replicate 13.1443861384479
Replicate 22.2200838157182
Replicate 32.8172293161353


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123655.p1 GENE.R_Transcript_123655~~R_Transcript_123655.p1 ORF type:5prime_partial len:606 (+),score=102.54,PPR|PF01535.16|0.38,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|2.6,PPR|PF01535.16|1.8,PPR|PF01535.16|0.16,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|0.00035,PPR|PF01535.16|3.8e+02,PPR|PF01535.16|2.1,PPR|PF01535.16|0.00049,PPR|PF01535.16|6.2e-05,PPR_2|PF13041.2|1.4e+03,PPR_2|PF13041.2|52,PPR_2|PF13041.2|59,PPR_2|PF13041.2|7.4e+02,PPR_2|PF13041.2|5.7e-06,PPR_2|PF13041.2|0.97,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|14,PPR_2|PF13041.2|4.1e-08,PPR_2|PF13041.2|1.3e-06,PPR_3|PF13812.2|6.3,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|16,PPR_3|PF13812.2|7.9e+03,PPR_3|PF13812.2|6.1e+03,PPR_3|PF13812.2|0.038,PPR_3|PF13812.2|0.24,PPR_1|PF12854.3|52,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|7e+03,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.44,PPR_1|PF12854.3|2.1e+02 R_Transcript_123655:1-1818(+)
AAAGAAACTACCCAAAATCTTTCATCTTTCTTTCTGCTTGCAAAACTGCTAATTCATGTCACAAGTCACAAGTCCCAACTCAGCCGCCAAATGTCTCCAAACACACCCACATTTATCCACCGTTTCATCAAAAATTTCTCTACATCTACCACTCCCATACCCACTTCTTCTACTTGGAGAAACCAAGCCAAACAACACCAACTTGTCACCCAAATTTCCACCATTCTTCTCCAAAGACACAACTGGTCATCTCTTCTTAAAACCCTCATTATTCCCCACAACCTAACCCCACAAATTTTCCTCCAAATCCTAGACAAAACCCAAACAAACCCAGGAATTTCTCTTGATTTCTTCAACTGGGCAAAGTCCAATCTTGGGTTTCAACCAGACCTCAAAACCCACTGCAAACTGACCCAGATCATAACCGGGTCAAATGACACCCGACCCATTAAACCCATCTTGGATTCCTTCATTGGATTTGACCCACCAACCCATGTTGTCCATTCCATGCTCCAAGCTTGTAAAGGTACAAACTTGCATGCTCTTGCTTTTAGCTTCATTATTGAGTGTTATGCCCAAAAGGGTTTGTATTTTGATGGCTTGTCTGTGTATAGAAAAATTGTATCACTTGGGTATTCGCCTAAAGTTAGTTGTTTGAATAAGGTGCTTGATGTTTTGGATCATGCTGGTGAGTTCAAATTGAGTAATTGCTTGTATGGTTCAATGTTTCGAAATGGGATTTTGTTTGATATGGAGACTTGGACTTTTATTGCTAGAATGTTGAGTAGGAGTGGGAGAGTTGAGAAAGTTGTGAGATTGTTGGATTTGGGTGTGTGTAATTTTGAGATTTTTGAGTTAGTGATTGGTTTTTATAGTAGAATGGGTGACTTTGAATCTGCATTTGATCAAGTAAGTGAGATGAGCAGAAAAAAAATCAAGCCAGGTTTTAGTACTTATGGGTCGATTCTCAATGGGGCTTGTAAATTTGGGGATGCAAGTGTGATAGAAATGGTTTTGTGTGCAATGAAAGAGAAGAAATTGATGTTGGGCAATGTGTTGTCTGGTTATGATGTTGTAATTAGGAAGTTGTGTGATTTGGGAAAGACTTATGCAGCTGAATTTTTGTTGAAAAGGGCATGGGATGAGAAGTTTCAGTTAAAAGATGCTACCGTTGGATGTATGCTAAGTGCATTCTGCAAAGAGGGGAGAGGGGATGAGGCCATGTGGTTGTATCGCCTCATTTTGTCAGAGAAGATTGCGGTGAAGAAAAGTTGTTTACAAGACTTGGTGGATAGTCTTTGTGAGAAAGAGCCAACGAAAGATTTATACGAGTTGTTGATCGGATTAATCAAAAGAGGCTTTAGCCCTTGTGTGTCTGATATTTCGAAGTTTATTATGAAACTCTCTAGGAAGGATAAATGGCTTCAAGTAGAGGAGCTTTTGGATGTGATGCTGCAGGCAGAATTGCTGCCTGATTGTGGTTGCTGTCGCTCAATGGTAAAGCATTACTGCTCCTCGGGTTGGATTGATTCTGCGCTCTGGTTTCATGATAAGTTGGGGACATTATGGGATGTTACTACTTACAATATACTCCTTCGAGCAATATTTATGGAAAAGAGGACTGAGGAAGCACTCGTTATTTTTGATTGCATGAGAAGGAAGAATGTAGTGAACACTGCAAGTTTTGTAGTCATGATCAGTGGATTGTCTCAAGAGAAGGAAATGAGAAAGGCCATGCAAGTTCATGATGAAATGTTGAAATTGGGGCTGAAGCCTGGTTTGAGAACTTACAAGAGTTTGGTGTCTGTTTTTAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123655.p1 GENE.R_Transcript_123655~~R_Transcript_123655.p1 ORF type:5prime_partial len:606 (+),score=102.54,PPR|PF01535.16|0.38,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|2.6,PPR|PF01535.16|1.8,PPR|PF01535.16|0.16,PPR|PF01535.16|4.1e+02,PPR|PF01535.16|0.00035,PPR|PF01535.16|3.8e+02,PPR|PF01535.16|2.1,PPR|PF01535.16|0.00049,PPR|PF01535.16|6.2e-05,PPR_2|PF13041.2|1.4e+03,PPR_2|PF13041.2|52,PPR_2|PF13041.2|59,PPR_2|PF13041.2|7.4e+02,PPR_2|PF13041.2|5.7e-06,PPR_2|PF13041.2|0.97,PPR_2|PF13041.2|0.22,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|14,PPR_2|PF13041.2|4.1e-08,PPR_2|PF13041.2|1.3e-06,PPR_3|PF13812.2|6.3,PPR_3|PF13812.2|0.028,PPR_3|PF13812.2|4.7,PPR_3|PF13812.2|1e+04,PPR_3|PF13812.2|16,PPR_3|PF13812.2|7.9e+03,PPR_3|PF13812.2|6.1e+03,PPR_3|PF13812.2|0.038,PPR_3|PF13812.2|0.24,PPR_1|PF12854.3|52,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|7e+03,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|3.2e+03,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.44,PPR_1|PF12854.3|2.1e+02 R_Transcript_123655:1-1818(+)
KETTQNLSSFFLLAKLLIHVTSHKSQLSRQMSPNTPTFIHRFIKNFSTSTTPIPTSSTWRNQAKQHQLVTQISTILLQRHNWSSLLKTLIIPHNLTPQIFLQILDKTQTNPGISLDFFNWAKSNLGFQPDLKTHCKLTQIITGSNDTRPIKPILDSFIGFDPPTHVVHSMLQACKGTNLHALAFSFIIECYAQKGLYFDGLSVYRKIVSLGYSPKVSCLNKVLDVLDHAGEFKLSNCLYGSMFRNGILFDMETWTFIARMLSRSGRVEKVVRLLDLGVCNFEIFELVIGFYSRMGDFESAFDQVSEMSRKKIKPGFSTYGSILNGACKFGDASVIEMVLCAMKEKKLMLGNVLSGYDVVIRKLCDLGKTYAAEFLLKRAWDEKFQLKDATVGCMLSAFCKEGRGDEAMWLYRLILSEKIAVKKSCLQDLVDSLCEKEPTKDLYELLIGLIKRGFSPCVSDISKFIMKLSRKDKWLQVEELLDVMLQAELLPDCGCCRSMVKHYCSSGWIDSALWFHDKLGTLWDVTTYNILLRAIFMEKRTEEALVIFDCMRRKNVVNTASFVVMISGLSQEKEMRKAMQVHDEMLKLGLKPGLRTYKSLVSVFK*

Click here to download the sequence:
Link to NCBI Protein BLAST