Transcript Information: R_Transcript_123796.p1


Annotated TAIR IDAT1G50420.1
Annotated Gene Namescarecrow-like 3
Annotated Gene Symbol(s)SCL3, SCL-3
Annotation TypeHomolog
Chromosome Positionchr1:18678177-18679625 | Reverse length=482
E-Value2E-149
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4188225952197
Replicate 20.74986787201064
Replicate 30.67372757635742
Condition 2: 8 Hour
Replicate 11.0288178549263
Replicate 21.033486135517
Replicate 31.0677418011992
Condition 3: 24 Hour
Replicate 10.77169099925056
Replicate 20.46334577501213
Replicate 30.96563403030429


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123796.p1 GENE.R_Transcript_123796~~R_Transcript_123796.p1 ORF type:complete len:476 (+),score=85.56,GRAS|PF03514.10|2.7e-127 R_Transcript_123796:260-1687(+)
ATGATTCAAGAAGGATCATCATCTGTGTCCTCATCATCACTCCAATACTTGTCCCTCATGGCATTATCCCCAAGCTTAGGCTCTCCATATCCATGGCTTAAGGAGCTAAAACCCGAGGAAAGAGGATTATATTTAATCCATCTTCTTCTTGCTTGTGCTAATCATGTTGCTTCTGGGAGTATTGAAAATGCAAATTTGAGCCTAGACCATATCTCCCATCTTGCATCTCCTAACGGAGATACAATGCAGCGCATAGCTGCATATTTCTCCGAAGCCTTTGCTGATCGTTTGCTTAAATCTTGGCCCGGAATCCACAAAGCCTTAAACTCTACCAATATATCTTCTGTTTCGGAACAAACCCTTGTTCGAAGATTGTTCTTTGACCTCCTTCCATTCTTGAAGCTTTCGTATCTCATCACAAACCAAGCCATCATGGAGGCCATCGAGGGTGAAAAGATGGTTCACATTATCGATCTTCATTCATCCGAATCAGCTCAGTGGATTAGCCTACTCCGAGCATTGAGTGCTCAACCTGAAGGTCCACCTCATTTGAGGATAACTGGTGTAAATGATCAGAAAGAGGTGTTAGACCAAATGGCTTGTCAATTGAATAAAGAGGCTGAAAAATTGGACATCCCCTTTCAATTCAACCCTATAGTGAGCAAATTAGAGGATCTTGATGTAGGAAGTTTGCGCGTCAAGACAGGGGAAGCACTTGCTATAAGTTCTGTTCTTCAATTGCATTCTCTTTTGGCATTTGATGATGATGAATCAATATCAAATGGCAAGACTGTAGCCTACTTGCACAGGTTTTTGCAAATGAAGGCCGGAAAATTGGCCAATTTTCCTGAGAAAGATTTGCTTAGAATCTTGAACCCGATTGAAGATTCAACAACAACGACAACAAATTCATCTCGAGTTTCTTCAAAGATGGAAACATTTCTGAAAGCTCTCAGTGGACTGTCACCAAAGCTAATGGTTGTAACGGAACAAGAGTCGAACCACAATGGAGGGACCCTAATGGAGAGGGTGATGGAATCATTGAACTTCTTCGCGGCATTGTTTGATTGTTTAGAGTCGAATCTATCGAGAGGAGCTCTCGAAAGACACAAGCTCGAAAGGATGCTCTTCGGAGAGGAGATCAAGAACATCATAGCAAGTGAAGGGAATGGTAGGAGAACAAGGCATGAGAAGCTAGTTAGATGGGTTCAAAGGATGGAATTGGGTGGGTTTGGAATGGTGCCATTGAGCTGCCATGGTTTCTTGCTGGCTAAAAGGTTCTTGCATAGCAATGGCTATCAAGGTTATAACATTAGGGAAGAAAATGGTTGTATTGTTTTATGTTGGCATGATCGACCGTTGTATTCTATTTCAGCTTGGAGAGTTGGGATGTATGATTCACAAATGCTGCTCACAAGTCATAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123796.p1 GENE.R_Transcript_123796~~R_Transcript_123796.p1 ORF type:complete len:476 (+),score=85.56,GRAS|PF03514.10|2.7e-127 R_Transcript_123796:260-1687(+)
MIQEGSSSVSSSSLQYLSLMALSPSLGSPYPWLKELKPEERGLYLIHLLLACANHVASGSIENANLSLDHISHLASPNGDTMQRIAAYFSEAFADRLLKSWPGIHKALNSTNISSVSEQTLVRRLFFDLLPFLKLSYLITNQAIMEAIEGEKMVHIIDLHSSESAQWISLLRALSAQPEGPPHLRITGVNDQKEVLDQMACQLNKEAEKLDIPFQFNPIVSKLEDLDVGSLRVKTGEALAISSVLQLHSLLAFDDDESISNGKTVAYLHRFLQMKAGKLANFPEKDLLRILNPIEDSTTTTTNSSRVSSKMETFLKALSGLSPKLMVVTEQESNHNGGTLMERVMESLNFFAALFDCLESNLSRGALERHKLERMLFGEEIKNIIASEGNGRRTRHEKLVRWVQRMELGGFGMVPLSCHGFLLAKRFLHSNGYQGYNIREENGCIVLCWHDRPLYSISAWRVGMYDSQMLLTSHN*

Click here to download the sequence:
Link to NCBI Protein BLAST