Transcript Information: R_Transcript_123798.p1


Annotated TAIR IDAT1G50420.1
Annotated Gene Namescarecrow-like 3
Annotated Gene Symbol(s)SCL3, SCL-3
Annotation TypeHomolog
Chromosome Positionchr1:18678177-18679625 | Reverse length=482
E-Value6E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3037829253371
Replicate 20.88219749648311
Replicate 30.91434456791365
Condition 2: 8 Hour
Replicate 10.61729071295576
Replicate 20.79860292289948
Replicate 31.1440090727135
Condition 3: 24 Hour
Replicate 10.33761481217212
Replicate 20.23167288750606
Replicate 30.1379477186149


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123798.p1 GENE.R_Transcript_123798~~R_Transcript_123798.p1 ORF type:complete len:476 (+),score=88.36,GRAS|PF03514.10|4.4e-127 R_Transcript_123798:260-1687(+)
ATGATTCAAGAAGGATCATCATCTGTGTCCTCATCATCACTCCAATACTTGTCCCTCATGGCATTATCCCCAAGCTTAGGCTCTCCATATCCATGGCTTAAGGAGCTAAAACCCGAGGAAAGAGGATTATATTTAATCCATCTTCTTCTTGCTTGTGCTAATCATGTTGCTTCTGGGAGTATTGAAAATGCAAATTTGAGCCTAGACCATATCTCCCATCTTGCATCTCCTAACGGAGATACAATGCAGCGCATAGCTGCATATTTCTCCGAAGCCTTTGCTGATCGTTTGCTTAAATCTTGGCCCGGAATCCACAAAGCCTTAAACTCTACCAATATATCTTCTGTTTCGGAACAAACCCTTGTTCGAAGATTGTTCTTTGACCTCCTTCCATTCTTGAAGCTTTCGTATCTCATCACAAACCAAGCCATCATGGAGGCCATCGAGGGTGAAAAGATGGTTCACATTATCGATCTTCATTCATCCGAATCAGCTCAGTGGATTAGCCTACTCCGAGCATTGAGTGCTCAACCTGAAGGTCCACCTCATTTGAGGATAACTGGTGTAAATGATCAGAAAGAGGTGTTAGACCAAATGGCTTGTCAATTGAATAAAGAGGCTGAAAAATTGGATATTCCCTTTCAATTCAACCCTATATTGAGCAAATTAGAGGATCTTGATGTAGGAAGTTTGCGCGTCAAGACAGGGGAAGCACTTGCTATAAGTTCTGTTCTTCAATTGCATTCTCTTTTGGCATTTGATGATGATGAATCAATATCAAATGGCAAGACTGTAGCCTACTTGCACAGGTTTTTGCAAATGAAGGCCGGAAAATTGGCCAATTTTCCTGAGAAAGATTTGCTTAGAATCTTGAACTCAAAGAAAGATTCAACAACAACAACAACGACGACGACAACAACTTCATCTCGAGTTTCTTCAAAGATGGAAACCTTTCTGAAAGCTCTTTGTGGACTGTCACCAAAGCTAATGGTTATAACGGAGCAAGAGTCGAACCACAATGGAGGGACCCTAATGGAGAGGGTGATGGAATCATTGAACTTCTATGCAGCATTGTTTGATTGTTTGGAGTCGAAACTATCGAGAGAAGCTCTCGAAAGATACAAGATCGAAAGGATGCTCTTCGGAGAGGAGATCAAGAACATCATAGCAAGTGAAGGGAATGGTAGGAGAACAAGGCATGAGAAGCTAGTTAGATGGGTTCAAAGGATGGAATTGGGTGGGTTTGGAATGGTGCCATTGAGCTGCCATGGTTTCTTGCTGGCTAAAAGGTTCTTGCATAGTAATGGCTATCAAGGATACAACATTAAGGAAGAAAATGGGTGTATTTTTTTATGTTGGCATGATCGACCGTTGTATTCTATTTCAGCTTGGAGACTTCGGATGTATGATTCACATTGCTGCTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123798.p1 GENE.R_Transcript_123798~~R_Transcript_123798.p1 ORF type:complete len:476 (+),score=88.36,GRAS|PF03514.10|4.4e-127 R_Transcript_123798:260-1687(+)
MIQEGSSSVSSSSLQYLSLMALSPSLGSPYPWLKELKPEERGLYLIHLLLACANHVASGSIENANLSLDHISHLASPNGDTMQRIAAYFSEAFADRLLKSWPGIHKALNSTNISSVSEQTLVRRLFFDLLPFLKLSYLITNQAIMEAIEGEKMVHIIDLHSSESAQWISLLRALSAQPEGPPHLRITGVNDQKEVLDQMACQLNKEAEKLDIPFQFNPILSKLEDLDVGSLRVKTGEALAISSVLQLHSLLAFDDDESISNGKTVAYLHRFLQMKAGKLANFPEKDLLRILNSKKDSTTTTTTTTTTSSRVSSKMETFLKALCGLSPKLMVITEQESNHNGGTLMERVMESLNFYAALFDCLESKLSREALERYKIERMLFGEEIKNIIASEGNGRRTRHEKLVRWVQRMELGGFGMVPLSCHGFLLAKRFLHSNGYQGYNIKEENGCIFLCWHDRPLYSISAWRLRMYDSHCCS*

Click here to download the sequence:
Link to NCBI Protein BLAST