Transcript Information: R_Transcript_123841.p1


Annotated TAIR IDAT2G38430.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16092950-16094810 | Reverse length=393
E-Value7E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3458670272959
Replicate 25.5014344840781
Replicate 37.433676864136
Condition 2: 8 Hour
Replicate 16.4746277504735
Replicate 29.1916124876027
Replicate 37.9849633257952
Condition 3: 24 Hour
Replicate 19.49217029607
Replicate 28.2707220839665
Replicate 310.365090921439


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123841.p1 GENE.R_Transcript_123841~~R_Transcript_123841.p1 ORF type:complete len:416 (+),score=86.97 R_Transcript_123841:240-1487(+)
ATGGCTTATGTTCCTCCACACAAGCGGCTGTCACAGACTCAAGGGGTTCCACCTCCTAATGCCGAGCTGTTAGTTCCTCACTTCAAGAAGAATGTGAATATCCATTCATCGAGATCTAATTCTGGCAGGAGGCCAGATAAGCGTACCTCACTTGGGAAGAAAATTATCTATGCTGATCATTCTATATCAAAGTCCTTGGCAGTCTCATTGACATATGATGGTCTGATTCCTTCTTCAGTACATTTGGTTCCCGTTTCTTTGGAATCAGCAGAGTGGAAAACTGGGTTGAAGCCATTAACTTTAGTCGGTGACCAGCAAGAGAAAGAGAAAAACAGTGGTGACCAGAAAAGTCCTTGGGTATCAGTGGCTGAAAATATACATTCAGATTTGCTTTCAGCCTTTGACAATGTAAGACGTCAAATGACAGATGATAACCTGGAAGAAATTAAGCCAACAATAGTTGCTTGGTTAGGGAAAGTACTCTTTAAAAGGAGTTCTTCACTTAGTGTGGACTCATTGAAGGAAAATTCCTTTACTGAAGCTAGTTTGAGAAAATTGAAAAGGACATTTTATACCAATTTGCCTAGTTCATACATCGAACACATACAGTCTGGAATTGTCCCACAAATTGGTGCTAATTTTGAGGAAGAAAAAGAGCTTTATCATGTCAAGCTGGCTGATGCCATGCGGCCTGACTCAACCATATCATGCAAATGCAGAGTCCAAAAGGGTGAAAACAAGCTTGAACTTTACAAGACTGAGTGGAACCAAGTGCGTAACCTAGTTGTGGACATATCATGCCTTGATAGTACTGTTGACCTGAGATTGGCACTCTGCACAAAAAGGATAATTAAAGTTCTCACTGATGAGGAGAAGCAAAGCATTGGAGCTCTGATTAATTCAGCAATACTAGACCATGATGTGAAAGGCGGTCTTAAGTGGCCCCTTGGGAAGGCCAATTCTGGATCTCGGTACAGTGTTGTTGGGGTTTGGCACACCAAGTCCGAATCCTACTGTAACTCATCTATGCGGCTTAGGTTGAGAGAGGCTGATCGATATGATTTTCTTACTTCTGCTGGTGAAGTTACTAAAGAAGTTGTTCTGAAGCTGAGAGGAGTTACAAAGAACCTATTGGAGCAGAAAAGTGAGGCTGTGGCTATTTCGACTTTACTTGAAGACACCTTGAAGTTGATATGGGATTACTTCCTGAGCTGGGATGGTAGTGTGATCGATACTTGTAAATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123841.p1 GENE.R_Transcript_123841~~R_Transcript_123841.p1 ORF type:complete len:416 (+),score=86.97 R_Transcript_123841:240-1487(+)
MAYVPPHKRLSQTQGVPPPNAELLVPHFKKNVNIHSSRSNSGRRPDKRTSLGKKIIYADHSISKSLAVSLTYDGLIPSSVHLVPVSLESAEWKTGLKPLTLVGDQQEKEKNSGDQKSPWVSVAENIHSDLLSAFDNVRRQMTDDNLEEIKPTIVAWLGKVLFKRSSSLSVDSLKENSFTEASLRKLKRTFYTNLPSSYIEHIQSGIVPQIGANFEEEKELYHVKLADAMRPDSTISCKCRVQKGENKLELYKTEWNQVRNLVVDISCLDSTVDLRLALCTKRIIKVLTDEEKQSIGALINSAILDHDVKGGLKWPLGKANSGSRYSVVGVWHTKSESYCNSSMRLRLREADRYDFLTSAGEVTKEVVLKLRGVTKNLLEQKSEAVAISTLLEDTLKLIWDYFLSWDGSVIDTCKY*

Click here to download the sequence:
Link to NCBI Protein BLAST