Transcript Information: R_Transcript_123842.p1


Annotated TAIR IDAT2G38430.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16092950-16094810 | Reverse length=393
E-Value3E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3056371732276
Replicate 20.44202737718522
Replicate 32.5317973132589
Condition 2: 8 Hour
Replicate 10.90211081384588
Replicate 21.0591996661614
Replicate 31.5285566838221
Condition 3: 24 Hour
Replicate 11.5707973366324
Replicate 21.3929637194049
Replicate 32.1887704686897


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123842.p1 GENE.R_Transcript_123842~~R_Transcript_123842.p1 ORF type:complete len:190 (+),score=39.42 R_Transcript_123842:240-809(+)
ATGGCTTATGTTCCTCCACACAAGCGGCTGTCACAGACTCAAGGGGTTCCACCTCCTAATGCCGAGCTGTTAGTTCCTCACTTCAAGAAGAATGTGAATATCCATTCATCGAGATCTAATTCTGGCAGGAGGCCAGATAAGCGTACCTCACTTGGGAAGAAAATTATCTATGCTGATCATTCTATATCAAAGTCCTTGGCAGTCTCATTGACATATGATGGTCTGATTCCTTCTTCAGTACATTTGGTTCCCGTTTCTTTGGAATCAGCAGAGTGGAAAACTGGGTTGAAGCCATTAACTTTAGTCGGTGACCAGCAAGAGAAAGAGAAAAACAGTGGTGACCAGAAAAGTCCTTGGGTATCAGTGGCTGAAAATATACATTCAGATTTGCTTTCAGCCTTTGACAATGTAAGACGTCAAATGACAGATGATAACCTGGAAGAAATTAAGCCAACAATAGTTGCTCGGTTAGGGAAAGTACTTTTTAAAAGGAGTTCTTTGCTTGGTGTGGACTCATTGACGGAAAATTCATTTACTGAAGAAAAGAACATTTTATACCTATGTGCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123842.p1 GENE.R_Transcript_123842~~R_Transcript_123842.p1 ORF type:complete len:190 (+),score=39.42 R_Transcript_123842:240-809(+)
MAYVPPHKRLSQTQGVPPPNAELLVPHFKKNVNIHSSRSNSGRRPDKRTSLGKKIIYADHSISKSLAVSLTYDGLIPSSVHLVPVSLESAEWKTGLKPLTLVGDQQEKEKNSGDQKSPWVSVAENIHSDLLSAFDNVRRQMTDDNLEEIKPTIVARLGKVLFKRSSLLGVDSLTENSFTEEKNILYLCA*

Click here to download the sequence:
Link to NCBI Protein BLAST