Transcript Information: R_Transcript_123856.p1


Annotated TAIR IDAT5G48470.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19641810-19644127 | Forward length=397
E-Value5.9E-193
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0220766321195
Replicate 22.0942601438251
Replicate 33.3393453784672
Condition 2: 8 Hour
Replicate 14.3210349906903
Replicate 23.9460379719739
Replicate 32.9246840641544
Condition 3: 24 Hour
Replicate 13.933946507049
Replicate 22.4255144048461
Replicate 32.6310028651769


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123856.p1 GENE.R_Transcript_123856~~R_Transcript_123856.p1 ORF type:complete len:391 (+),score=98.35 R_Transcript_123856:109-1281(+)
ATGGCATGCGGGCCAATTACATCCCCAAATTCTCTCTCCTCACTCTCAACACTCTTCCCATCACCACTTCCCTGCATCCAATTTCGCACCCATTTCAACCAACTCAGCAAATTTTCTGTAAAGGGAAGAATGTCAAGTTTCCTATTCCTGTGTACTAGCTATGAAGTGGGTGGTGGGTACCCAGAATCTGATTTTGCAACTAAAGAAGGAAAATCTGATACCCAAGATCAATTCAACCAGAAATTGGACACCTCTGAGCGTGAAGCTCTGCTTAAGGGTGGAGAACAGGTCACTTCTGTTCTTCAGGAGATGATTACTCTTCTAGAGGATATGAACATGGATGAAGCTTCTGAGGAAGTTGCCGTGCAGTTGGCTGCACAAGGGGTTATTGGCAAGAGAGTTGATCAAATGGAGGCAGGATTCATGATGGCTCTGGATTACATGATTCAAACAGCTGAAAATGACAATGATGATCAGCGCAAGTCACTGTTGGAGGTCATCAAGGAGACGGTATTATCACATCTCACAAAGAAATGCCCCCCACATGTACAAGTAATTGGATTGCTTTGTAGAACTCCAAATAAGGAGAGCAGACATGAGTTGCTGCATCGAGTGGCTGCTGGAGGTGGAGAATTTAAGGGTGAAAATGGCACAAAAGTTCATCTTCCAGGTGCAAATCTGCTTGATATTGCCAACCAGGCTGATGATTTGTTGGAGACAATGGAGACAAGACCGGTTGTTCCTGATAGAAAGTTGCTGGCAAGGCTTGTTTTAATCAGAGAAGAAGCTCGAAATATGCTGGGAGGAGGAATACTTGATGAAAAAAATGATCGTGGTTTTAATACCCTCCCCGAATCAGAGGTGAATTTTTTGACCAAGCTAGTCGCCTTGAAACCTGGTAAGAAAGTCCAAGAGATGATTAAAAATGTAATGCAAGGCAAGGATGAAGGTGCAGACAATGAGGAAAACAGAACTGGTGGTTCTCGTGGAGTTATAGGGAGAGAAAGTTTGACTGGGCGTAAACCCCTTCCAGTGCGCCCAGGGATGTTTCTCGAGACAGTATCAAAGGTATTGGGGGGTATCTATGCAGGAAATGTCTCAGGCATTACTGCTCAACATTTAGAATGGGTGCACCAAAAGACACTTCAAGTTCTTGAGGAGATAGCATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123856.p1 GENE.R_Transcript_123856~~R_Transcript_123856.p1 ORF type:complete len:391 (+),score=98.35 R_Transcript_123856:109-1281(+)
MACGPITSPNSLSSLSTLFPSPLPCIQFRTHFNQLSKFSVKGRMSSFLFLCTSYEVGGGYPESDFATKEGKSDTQDQFNQKLDTSEREALLKGGEQVTSVLQEMITLLEDMNMDEASEEVAVQLAAQGVIGKRVDQMEAGFMMALDYMIQTAENDNDDQRKSLLEVIKETVLSHLTKKCPPHVQVIGLLCRTPNKESRHELLHRVAAGGGEFKGENGTKVHLPGANLLDIANQADDLLETMETRPVVPDRKLLARLVLIREEARNMLGGGILDEKNDRGFNTLPESEVNFLTKLVALKPGKKVQEMIKNVMQGKDEGADNEENRTGGSRGVIGRESLTGRKPLPVRPGMFLETVSKVLGGIYAGNVSGITAQHLEWVHQKTLQVLEEIAF*

Click here to download the sequence:
Link to NCBI Protein BLAST