Transcript Information: R_Transcript_123858.p1


Annotated TAIR IDAT5G48470.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19641810-19644127 | Forward length=397
E-Value3.3E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.36728222302562
Replicate 30.20035047460192
Condition 2: 8 Hour
Replicate 10
Replicate 20.71711282872607
Replicate 31.6934447226017
Condition 3: 24 Hour
Replicate 11.0709181214089
Replicate 20
Replicate 32.233439253765


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123858.p1 GENE.R_Transcript_123858~~R_Transcript_123858.p1 ORF type:complete len:343 (+),score=87.69 R_Transcript_123858:109-1137(+)
ATGGCATGCGGGCCAATTACATCCCCAAATTCTCTCTCCTCACTCTCAACACTCTTCCCATCACCACTTCCCTGCATCCAATTTCGCACCCATTTCAACCAACTCAGCAAATTTTCTGTAAAGGGAAGAATGTCAAGTTTCCTATTCCTGTGTACTAGCTATGAAGTGGGTGGTGGGTACCCAGAATCTGATTTTGCAACTAAAGAAGGAAAATCTGATACCCAAGATCAATTCAACCAGAAATTGGACACCTCTGAGCGTGAAGCTCTGCTTAAGGGTGGAGAACAGGTCACTTCTGTTCTTCAGGAGATGATTACTCTTCTAGAGGATATGAACATGGATGAAGCTTCTGAGGAAGTTGCCGTGCAGTTGGCTGCACAAGGGGTTATTGGCAAGAGAGTTGATCAAATGGAGGCAGGATTCATGATGGCTCTGGATTACATGATTCAAACAGCTGAAAATGACAATGATGATCAGCGCAAGTCACTGTTGGAGGTCATCAAGGAGACGGTATTATCACATCTCACAAAGAAATGCCCCCCACATGTACAAGTAATTGGATTGCTTTGTAGAACTCCAAATAAGGAGAGCAGACATGAGTTGCTGCATCGAGTGGCTGCTGGAGGTGGAGAATTTAAGGGTGAAAATGGCACAAAAGTTCATCTTCCAGGTGCAAATCTGCTTGATATTGCCAACCAGGCTGATGATTTGTTGGAGGTGAATTTTTTGACCAAGCTAGTCGCCTTGAAACCTGGTAAGAAAGTCCAAGAGATGATTAAAAATGTAATGCAAGGCAAGGATGAAGGTGCAGACAATGAGGAAAACAGAACTGGTGGTTCTCGTGGAGTTATAGGGAGAGAAAGTTTGACTGGGCGTAAACCCCTTCCAGTGCGCCCAGGGATGTTTCTCGAGACAGTATCAAAGGTATTGGGGGGTATCTATGCAGGAAATGTCTCAGGCATTACTGCTCAACATTTAGAATGGGTGCACCAAAAGACACTTCAAGTTCTTGAGGAGATAGCATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123858.p1 GENE.R_Transcript_123858~~R_Transcript_123858.p1 ORF type:complete len:343 (+),score=87.69 R_Transcript_123858:109-1137(+)
MACGPITSPNSLSSLSTLFPSPLPCIQFRTHFNQLSKFSVKGRMSSFLFLCTSYEVGGGYPESDFATKEGKSDTQDQFNQKLDTSEREALLKGGEQVTSVLQEMITLLEDMNMDEASEEVAVQLAAQGVIGKRVDQMEAGFMMALDYMIQTAENDNDDQRKSLLEVIKETVLSHLTKKCPPHVQVIGLLCRTPNKESRHELLHRVAAGGGEFKGENGTKVHLPGANLLDIANQADDLLEVNFLTKLVALKPGKKVQEMIKNVMQGKDEGADNEENRTGGSRGVIGRESLTGRKPLPVRPGMFLETVSKVLGGIYAGNVSGITAQHLEWVHQKTLQVLEEIAF*

Click here to download the sequence:
Link to NCBI Protein BLAST