Transcript Information: R_Transcript_12389.p1


Annotated TAIR IDAT1G49980.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18508026-18512111 | Forward length=671
E-Value5.4E-247
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0646115256078
Replicate 20.96846404134216
Replicate 30.88753042346716
Condition 2: 8 Hour
Replicate 10
Replicate 20.70135607250951
Replicate 31.9759133332156
Condition 3: 24 Hour
Replicate 11.6519455385248
Replicate 21.0580013489945
Replicate 32.0595441679553


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_12389.p1 GENE.R_Transcript_12389~~R_Transcript_12389.p1 ORF type:3prime_partial len:542 (+),score=110.06,IMS|PF00817.16|1.5e-46,IMS_C|PF11799.4|1e-17,IMS_HHH|PF11798.4|1.7e-05 R_Transcript_12389:91-1713(+)
ATGGAGAAGAGCGAAGCTTCAAGTTCGAGCGAAAATCCTCCAGTTTCAAAGCCATGGCAATCCTATCACACTGTCTTCACCAACGCCAAAGCAGGCATGGACGGAGTGGATAAGGAAAAAGTTCAAAGAATAGTGTATGAAAGGAGCAAAGGGCCCAAGTTCTTCGAAAATGAGGAACGTAAGGAAGCTTTTATAAAGAAGAAAATTGAAAACATGCATGACCGGTTTGCAAAGCTCTCAGCTGCTGATATATCACATTATAAGAAGGTTGCTGAGAGAAGAATGATAGAGTTAGAAGCTAAACGTGACTTGTCAAGACTTTGGCTTCATGTGGATATGGATGCCTTCTATGCTGCTGTTGAGACATTAAGTAATCCTTCATTAAAGGGCAAACCTATGGCTGTCGGCAGCATGTCTATGATATCTACTGCTAATTATGAGGCACGGAAATATGGGGTTCGTGCTGCAATGCCTGGCTTCATTGCACGTAAATTGTGCCCTGAGTTAATCTTTGTACCCACAGATTTTGAGAAGTATACTTATTATAGTACCTTAACTAGAAAAGCGTTCAAAAGATATGACACCAACTTCATTGCAGCTAGTTTAGATGAAGCATACCTTGATATAACTGAGGTTTGCCAAGAGAGAAACCTGAGTAGTAGTGAAGTTGCTGAAGAGCTTCGTAGGAGTGTTTTTGAAGAAACTGGTCTTACGTGTAGCGCTGGAGTAGCTCCCAACCGGTTGCTTGCTAAGGTTTGTTCTGACATAAAAAAGCCAAATGGGCAATTTGTTTTGCCAAATGATCGAATGGCTGTCAAGACTTTCATATCCTCCCTTCCTATAAGAAAGATTGGAGGCATTGGCAAAGTTACAGAACATATCTTAAAAGATGTATTTGGAATTAGTACATGCGAGGATATGCTTCAGAAGGGTGGCTTTCTCTGTGCATTGTTTTCTCAGTCATCAGCAGATTTTTTCCTTTCCGTCGGATTAGGACTTGGGAGGACAGATGCTCCAGAAACAAGGCTTCGGAAGAGTATGAGTAATGAGAGAACATTTTCTGCCACAGAGGATGAAGCATTGCTTTATCAGAAGTTAGCTGAACTTGCTGATATGCTAGCAACTGATTTGCAAAAGGAGGGACTTCGTGGGCGAACCCTGTCACTTAAACTGAAAACTGCTTCGTTTGAGGTTCGAAGTAGAGCAGTGACATTGCAGAAGTGCATATGTTCAAGTGACGATATATTGGGTCATGCTAGGAAACTGCTGAAAGCTGAACTACCTTCATCATTAAGGCTTATTGGCCTGCGAATGTCTCATTTTATTGAAGAGAAGGATGGACCATCTGATCCTACTCAAAAATCCATTACCAACTTTGTGATATTGGGAGATGCTTCTCGAAATAACGTTCATCGCAGTTGCTGTTTAATTTCAAATGTAAAAAGTAATAGTTTTGCCAATATCCAAGCCGATAGTCTTCCTACTTGTGACCACAGTACCAATGATGACCAGAGAGTTGTCTTCGACAGCGATCAATTATCAGAATTTGGACACAGCAACTGCAGTGTCAGTGAAAATGCTACTGACAATGACAATGGCATGGACCATAACAATGAGCCTATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_12389.p1 GENE.R_Transcript_12389~~R_Transcript_12389.p1 ORF type:3prime_partial len:542 (+),score=110.06,IMS|PF00817.16|1.5e-46,IMS_C|PF11799.4|1e-17,IMS_HHH|PF11798.4|1.7e-05 R_Transcript_12389:91-1713(+)
MEKSEASSSSENPPVSKPWQSYHTVFTNAKAGMDGVDKEKVQRIVYERSKGPKFFENEERKEAFIKKKIENMHDRFAKLSAADISHYKKVAERRMIELEAKRDLSRLWLHVDMDAFYAAVETLSNPSLKGKPMAVGSMSMISTANYEARKYGVRAAMPGFIARKLCPELIFVPTDFEKYTYYSTLTRKAFKRYDTNFIAASLDEAYLDITEVCQERNLSSSEVAEELRRSVFEETGLTCSAGVAPNRLLAKVCSDIKKPNGQFVLPNDRMAVKTFISSLPIRKIGGIGKVTEHILKDVFGISTCEDMLQKGGFLCALFSQSSADFFLSVGLGLGRTDAPETRLRKSMSNERTFSATEDEALLYQKLAELADMLATDLQKEGLRGRTLSLKLKTASFEVRSRAVTLQKCICSSDDILGHARKLLKAELPSSLRLIGLRMSHFIEEKDGPSDPTQKSITNFVILGDASRNNVHRSCCLISNVKSNSFANIQADSLPTCDHSTNDDQRVVFDSDQLSEFGHSNCSVSENATDNDNGMDHNNEPI

Click here to download the sequence:
Link to NCBI Protein BLAST