Transcript Information: R_Transcript_123905.p1


Annotated TAIR IDAT4G38380.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17971855-17974787 | Reverse length=560
E-Value3.6E-212
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9732304533185
Replicate 22.0618298281144
Replicate 32.4368869783141
Condition 2: 8 Hour
Replicate 12.5648041843268
Replicate 23.6231216076553
Replicate 33.4758403315635
Condition 3: 24 Hour
Replicate 13.4943961901415
Replicate 22.8877589382098
Replicate 33.9763260560485


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123905.p1 GENE.R_Transcript_123905~~R_Transcript_123905.p1 ORF type:complete len:611 (+),score=120.46,MatE|PF01554.14|0.076,MatE|PF01554.14|1.8e-11,MatE|PF01554.14|5.1e+02,MatE|PF01554.14|2.5e-10,Polysacc_synt_C|PF14667.2|5.9e+03,Polysacc_synt_C|PF14667.2|6.3e+03,Polysacc_synt_C|PF14667.2|2.8e-08,Polysacc_synt_C|PF14667.2|1.4e+04,Polysacc_synt_C|PF14667.2|3.4e+03 R_Transcript_123905:147-1979(+)
ATGAGCAGGGTAGAAAGGATGACGACTGCTCAATTTTGTGGTGGAAATATCTCCACTGCATTAACTAGCACTAGGAGAGGATGGAGCATGCTGAAGAGGACTAATGGCTCAAATTCTCTGGAGCGATCAGGAGGGATTTGTCATGCATCATTACAAGCTATTTGTAAGGGTTCTGGAGACGTTCCGAGACACTGCCATTTATATGTTAATAGAAGAAACCTTTCTCTTGAAGCAGCCATTCCATGTAGAAAGCCTTTTGAGAATGTGCTACATAATCGAGTGAGTTCAGATTGCAGCATCGAGCCTTGTGATGTGGAGGATGTTCCCAGTGATTTGGAGGAGGAACCTCATGATTTGAAGGAGTTCACAATAGAGAAAGGCAAGGAAATCAATTGTTTAAGTGATTCAACATGCCTGCTTCCAGATCAAAGGCAATCTCATAATGTTAAAAAGGAGCTTATAATGCTTTCTTTGCCAGCAATGGCTAGCCAGGCAATTGATCCTTTAGCGCAGCTGATGGAGACTGCTTATATTGGCAGATTAGGTCCTGTACAATTGGCATCAGCTGGTGTTTCTGTATCAATCTTCAATATAATCTCAAAGCTATTTAACATACCACTTCTGAGTGTTGCCACTTCTTTTGTTGCTGAAGACATTGCTAAGTCTACATCAGGGCGTGAAGGCAACAATAATGGTAAGCTCGACCACGAAGTCAATGAAAGAAAGCAATTATCGTCTGTTTCTACTGCCTTACTGCTTGCTCTTGGGATTGGCGTCATTGAGGCTTCCGCATTGCTTTTGGGATGTGGACCATTCCTGAGTTTGATGGGTGTCTCACCAGATTCTCCAATGCGAGCTCCAGCAGAGAAATTTTTGTCAATTAGAGCTCTTGGGGCCCCTGCTGTTGTTCTTTCTTTGGCTCTCCAGGGTGTTCTCAGGGGCTTTAAGGATACAAAGACCCCTGTCTTCTGTCTAGGTATTGCTAATCTTGCAGCTGTTTTCCTTTTTCCACTTCTCATAAATTATTTTCAGATGGGTGTAACTGGTGCAGCCATGGCCACTGTTCTATCCCAATACATAGGTAGCTTTTTGATGATGTGTTATCTTAGTAAGAGAGCAGTGTTATTACCTCCAAAGTTGGGAGATCTCCGGTTTGGTGTCTATCTAAAGTCTGGTGGCTTTCTTATTGGAAGAACCTTGGCTGTTTTGGCAACTATGACCATTGGAACCTCCATGGCTGCTCGTCAGGGTCCTGTAGCTATGGCTGCTCATCAAGTCTGTTTGCAAGTCTGGTTGGCTGTTTCTCTCCTAACTGATGCATTAGCCTCATCTGCACAGGCTCTGGTTGCTAGTTCCCTGTCAAGGGGTGACTACAATACAGTGAAAGAGCTGACTAACTTCGTCTTGAAGATTGGAGTACTCACAGGTGCCGCTTTGGCTGCAATTTTGGGATCATCTTTTGGTTCTTTGGCAAATATGTTTACAAAAGACACTGGGGTATTAGAAATTGTGAAATCTGGCACTCTGTTTGTCAGTGCTAGCCAACCGTTCAATGCTTTGGCTTTTATCTTTGATGGTCTTCACTACGGTGCTTCAGATTTTCCTTATGCTGCGTGTTCCATGATGTTAGTAGGGGCAATATCCACTGCAGTTCTTCTGTATGCTCCTTCAGCAATGGGTCTTCCTGGTGTCTGGCTGGGCTTGACTCTCTTTATGGCACTGCGTATGGTAGCAGGATACGCCAGAATACAATCGAAAAATGGTCCATGGTGGTTCTTGCATAGTAAATCTACACAACTTGTAGGAATTAATGATCAACTTGGAAACAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123905.p1 GENE.R_Transcript_123905~~R_Transcript_123905.p1 ORF type:complete len:611 (+),score=120.46,MatE|PF01554.14|0.076,MatE|PF01554.14|1.8e-11,MatE|PF01554.14|5.1e+02,MatE|PF01554.14|2.5e-10,Polysacc_synt_C|PF14667.2|5.9e+03,Polysacc_synt_C|PF14667.2|6.3e+03,Polysacc_synt_C|PF14667.2|2.8e-08,Polysacc_synt_C|PF14667.2|1.4e+04,Polysacc_synt_C|PF14667.2|3.4e+03 R_Transcript_123905:147-1979(+)
MSRVERMTTAQFCGGNISTALTSTRRGWSMLKRTNGSNSLERSGGICHASLQAICKGSGDVPRHCHLYVNRRNLSLEAAIPCRKPFENVLHNRVSSDCSIEPCDVEDVPSDLEEEPHDLKEFTIEKGKEINCLSDSTCLLPDQRQSHNVKKELIMLSLPAMASQAIDPLAQLMETAYIGRLGPVQLASAGVSVSIFNIISKLFNIPLLSVATSFVAEDIAKSTSGREGNNNGKLDHEVNERKQLSSVSTALLLALGIGVIEASALLLGCGPFLSLMGVSPDSPMRAPAEKFLSIRALGAPAVVLSLALQGVLRGFKDTKTPVFCLGIANLAAVFLFPLLINYFQMGVTGAAMATVLSQYIGSFLMMCYLSKRAVLLPPKLGDLRFGVYLKSGGFLIGRTLAVLATMTIGTSMAARQGPVAMAAHQVCLQVWLAVSLLTDALASSAQALVASSLSRGDYNTVKELTNFVLKIGVLTGAALAAILGSSFGSLANMFTKDTGVLEIVKSGTLFVSASQPFNALAFIFDGLHYGASDFPYAACSMMLVGAISTAVLLYAPSAMGLPGVWLGLTLFMALRMVAGYARIQSKNGPWWFLHSKSTQLVGINDQLGNN*

Click here to download the sequence:
Link to NCBI Protein BLAST