Transcript Information: R_Transcript_123959.p1


Annotated TAIR IDAT5G50350.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20498697-20501611 | Reverse length=584
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5290986314987
Replicate 22.4290490180503
Replicate 33.6302278282333
Condition 2: 8 Hour
Replicate 12.9879740109951
Replicate 22.6932282407767
Replicate 33.825933775771
Condition 3: 24 Hour
Replicate 12.8742738050533
Replicate 23.2506166035241
Replicate 33.5381075722084


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123959.p1 GENE.R_Transcript_123959~~R_Transcript_123959.p1 ORF type:5prime_partial len:631 (+),score=133.18 R_Transcript_123959:3-1895(+)
AAAACAAAAATTTTTGGAGCTAAAAAGAATTCACCCAGTCACTTTCCATTTCACCATTGTCATCCAACCCTTCACATCCCACCCAAAATCAAACAAACAAACATCCCTCTACTATTATTACTATGTACTAACAACCTCCCCTCCATCATCAATCAATCTCAAAAGATGGTAACCTCAACCTTCAAATCCACCTCAAGAAGAACCCTTTCTTCAACTCCAACCCAACAACAAAATCCGACCCAGAAAGCCCCACTTAGGAGATCAAGAAGTGTGAGTGCATTTCCAAGTGCCCATTTGGATGTAACCTCAGATTTCCACAACAAAAGGGACAATCCCCTCTTCTGGGTTGATGGGTCCCCTTCTTCTGATGGTAAAGACTTCAACTTTGATGATTTCTCTTCAAATTTGATTGACCCACCTGCTGTAAAGGGCCCCATTGGTGATGGTGAGAGTACAAGTAGGAGGGGAAGGTCAGTTTCACGGAATTCTGGTGGTAAAGAGAGAAATTTTCAGTCTTCTGGTCCTTCTTCTGGCCGGAGCTTGTCTAGGGTCGATACCGGCCGCTGCCGGCGGTCACCCTCTCGAGGGCATTCTGGGAATTCTGAGCGTGAGAAGGACCGAGGAAGTGCTGTATTACCAAATTTCAGTAGCAAAAGTAAGGTTAGGTTCAATGCCAATCATAGTTCATCAGAGGAGAAAAACAAACTGGGTAGAAGTACATCAGATTTGTCTGAACTATTAAAAGGCTCAAAAGCACGGTCAAATCTACATTCCGCATATGAGACTGCAGATGATTCTGTTGTTAGTGTGTCTGGTTCACGGATATCACACTGGGAAGATGCCAGATCAACCAGTTCCAGTTCAGAAGCTGAAGAGAAGACTGTTAAACGAAATTCAGAGGAGAATAAGATAAGTCATTTGAAAGAGGATAATGATGCAAATGGTGGGATTCTAGATACTGTTCGTACTGAAGTTAGACGTGCGATCACTGACATGCAACATGACTTCAAAAATGCTATGCTCAGGACTAACTCAGATGTTACTAGCAGTAGTATTCTCTCTGATATTGCTTCCGAATTGGCAAATCCAAGTGCTGTAGATTTTACGAGTGATATTAGAGGGGAATATGCCAAAGAACTGGAGGAGTGTGAGGAACGTGCTCGCAAACTTAGAGCAGAGTTGGCAATTGAAGAGCATCGTGGGCTTGAACTCAATAAGATCCTCAGTGATATTATACCAGAGCCAAAGACTCCTCAAACGCAAAAACCCCCTGCAGTAAGAAAGGCTAGTTTGGAGAGGAGGAAAATGTCAAGGCGCCTTGAAGAGGAAGCTATGGCTTATTTTGATGAGTGTGTTTCAATATCAACATTTGATGATTCTGACTTTTCTTCCCTGGAGGATCCACCATCTACCACTGCTAGGTTCACTGACACAGGTGATGGGAATATGACTGTATCAGCAGTCCCAAGCAAAGACAATCTTGCTTGTCTCTTTGAGAGCCAGGGTCATACAAGGAAAAGTCCACTCGCTCAATGCAATGAGAATTCTGGTTTAGCAGCTAACAGTTGCCACGATTCTGCACATTCGAGTAATCAGAACAGTTTGAAGCAACAGTTTTCTTTTCTTCCCAAGCCAACACACGCCACTTCACTTGAATACAACATAAGAAATTACGTCAAAAGCTTCTCCAAGAGCAACAGTGAAAGAGAAAGCAGCAACTCTCAGATTGTTAGTGTAGGCCATCGGAACATGGAGGACTACGCCTCCCAATTGCCTACGGAGAAGTTTTTGCTTGACAGGGTGACCTTCCGGAGCAGAATAGAGTCCGGTAGCATGGTGTTATGCGGTGGGGGTTTCGGATTTCCTGTTTCCTCTTTTGCTTCATTTTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123959.p1 GENE.R_Transcript_123959~~R_Transcript_123959.p1 ORF type:5prime_partial len:631 (+),score=133.18 R_Transcript_123959:3-1895(+)
KTKIFGAKKNSPSHFPFHHCHPTLHIPPKIKQTNIPLLLLLCTNNLPSIINQSQKMVTSTFKSTSRRTLSSTPTQQQNPTQKAPLRRSRSVSAFPSAHLDVTSDFHNKRDNPLFWVDGSPSSDGKDFNFDDFSSNLIDPPAVKGPIGDGESTSRRGRSVSRNSGGKERNFQSSGPSSGRSLSRVDTGRCRRSPSRGHSGNSEREKDRGSAVLPNFSSKSKVRFNANHSSSEEKNKLGRSTSDLSELLKGSKARSNLHSAYETADDSVVSVSGSRISHWEDARSTSSSSEAEEKTVKRNSEENKISHLKEDNDANGGILDTVRTEVRRAITDMQHDFKNAMLRTNSDVTSSSILSDIASELANPSAVDFTSDIRGEYAKELEECEERARKLRAELAIEEHRGLELNKILSDIIPEPKTPQTQKPPAVRKASLERRKMSRRLEEEAMAYFDECVSISTFDDSDFSSLEDPPSTTARFTDTGDGNMTVSAVPSKDNLACLFESQGHTRKSPLAQCNENSGLAANSCHDSAHSSNQNSLKQQFSFLPKPTHATSLEYNIRNYVKSFSKSNSERESSNSQIVSVGHRNMEDYASQLPTEKFLLDRVTFRSRIESGSMVLCGGGFGFPVSSFASFL*

Click here to download the sequence:
Link to NCBI Protein BLAST