Transcript Information: R_Transcript_123981.p1


Annotated TAIR IDAT1G03600.1
Annotated Gene Namephotosystem II family protein
Annotated Gene Symbol(s)PSB27
Annotation TypeHomolog
Chromosome Positionchr1:898916-899440 | Forward length=174
E-Value2E-21
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8517496620729
Replicate 21.0650297312615
Replicate 31.6599085214603
Condition 2: 8 Hour
Replicate 11.0646028237933
Replicate 20.64814150264306
Replicate 31.0522672823413
Condition 3: 24 Hour
Replicate 10.99816553163931
Replicate 20.47946214979516
Replicate 30.63442622280862


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_123981.p1 GENE.R_Transcript_123981~~R_Transcript_123981.p1 ORF type:internal len:138 (-),score=25.37,PSII_Pbs27|PF13326.2|1.6e-11 R_Transcript_123981:2-412(-)
TCACATAGCCCAACTATGGCCTCCCCTGCCTTGATCACCCCAACTTCCAAGCCCAAAACTCTCCCTTCTAACTCCATCAAATCCAAACTCACCACTAATATCACTACCACCTCTGTCACTCCACCCGCCACCACGGCCACCGCCCTCAGCCGTCGCCAGCTCACAGCCACTGCCCTTGCGGCTGCCATTCTATCTCCTACACTTCTATCCCCCGCCACTGCCTGGGCCTCCGACGATGAGGAATACGTAAATGAGACAAAGGAGGTGATCAACAAGGTCCGGAGTACCATCACTATGGACAGAAATGACCCAAATGTGGCTGATGCAGTTGCTGAGCTTAGAGAAACTTCCAACTCATGGGTTGCTAAGTATAGGAGAGAGAAGGCTCTTCTTGGCAGGGTTTCATTCCGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_123981.p1 GENE.R_Transcript_123981~~R_Transcript_123981.p1 ORF type:internal len:138 (-),score=25.37,PSII_Pbs27|PF13326.2|1.6e-11 R_Transcript_123981:2-412(-)
SHSPTMASPALITPTSKPKTLPSNSIKSKLTTNITTTSVTPPATTATALSRRQLTATALAAAILSPTLLSPATAWASDDEEYVNETKEVINKVRSTITMDRNDPNVADAVAELRETSNSWVAKYRREKALLGRVSFR

Click here to download the sequence:
Link to NCBI Protein BLAST